Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00912 ATGGGTAAACCACAGAATTCAAGGGGCGACGATGAACTTCACACGGTGGCGAGGTCAGGTGATCTGAACGCTGTTCAGTCAATTTTGAGCTCAAATCCTCTGGCCGTTAATTCCAGAGATAAGCACTCAAGAACACCGCTACATTTAGCAGCATGGTCCGGCCAAGCAGAAGTTGTCAGTTATCTTTGCAAGCACAAGGCTGATGTTGGTGCTGCTGCCATGGATGACATGGGAGCAATACACTTTGCTGCACAAAAGGGACATTTACAAGTTGTTCGGACCCTTGTTTCAGCTGGGGCCTCCGTGAAAGCTTCCACTCGTAAAGGCTTGAATTCATTGCACTATGCAGCTCAAGGGTCAAATCTAGAACTCGTCAAGTATTTGGTAAAGAAAGGGGCAAGTCTCAGTGCCAAGACAAAGGCTGGAAAGACTGCTTTGGATCTTGCCACCAATGAAGAAATCCGCTCCTTTCTAGAAGAGTTTGAAAGATCAACTAAAAATGGAGAATCAAGCAGCAAAAAGAAAGCTGAAGAATCTGACATGAAAACATCCACATCGGGAGCAGAAGATAATTTGGAAATAGAACCTCCTGCAGCTGCCGTTGATGAAAAAAATATTGACAGAGAGAAGAGGAAGGGTAATGAAGATGATGTAAAAGAAGCTATATCATTACCAAAGAAGGCAAGGATTAAGCTAAGCCATCTCCAGAGTTCAGACGATGCCCAGGAAGAAGAAGACGAGTAA 744 0.4449 MGKPQNSRGDDELHTVARSGDLNAVQSILSSNPLAVNSRDKHSRTPLHLAAWSGQAEVVSYLCKHKADVGAAAMDDMGAIHFAAQKGHLQVVRTLVSAGASVKASTRKGLNSLHYAAQGSNLELVKYLVKKGASLSAKTKAGKTALDLATNEEIRSFLEEFERSTKNGESSSKKKAEESDMKTSTSGAEDNLEIEPPAAAVDEKNIDREKRKGNEDDVKEAISLPKKARIKLSHLQSSDDAQEEEDE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00912 247 Gene3D - 9 185 IPR036770 -
Bach4g00912 247 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Bach4g00912 247 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Bach4g00912 247 ProSiteProfiles Ankyrin repeat region circular profile. 42 69 - -
Bach4g00912 247 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Bach4g00912 247 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Bach4g00912 247 MobiDBLite consensus disorder prediction 160 247 - -
Bach4g00912 247 SMART ANK_2a 75 104 IPR002110 GO:0005515
Bach4g00912 247 SMART ANK_2a 42 71 IPR002110 GO:0005515
Bach4g00912 247 SMART ANK_2a 108 137 IPR002110 GO:0005515
Bach4g00912 247 SMART ANK_2a 8 38 IPR002110 GO:0005515
Bach4g00912 247 Pfam Ankyrin repeats (3 copies) 80 158 IPR002110 GO:0005515
Bach4g00912 247 Pfam Ankyrin repeats (3 copies) 10 70 IPR002110 GO:0005515
Bach4g00912 247 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Bach4g00912 247 PRINTS Ankyrin repeat signature 124 138 IPR002110 GO:0005515
Bach4g00912 247 PANTHER ANKYRIN REPEAT PROTEIN 5 185 - -
Bach4g00912 247 MobiDBLite consensus disorder prediction 160 184 - -
Bach4g00912 247 SUPERFAMILY Ankyrin repeat 6 156 IPR036770 -
Bach4g00912 247 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Bach4g00912 247 MobiDBLite consensus disorder prediction 200 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00912 Bach-Chr4 6121889 6123487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00912 6 172 Ion Channels AT2G26650 32.768 2.78e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00912 - - gmx:100815134 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00912 4 6121889 6123487 Bach4g00912 4 6121889 6123487 ECH