Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00908 ATGTCTATTCCATCTATGGCGGATAAAGTTACTATCGCAACTGACAATCTAACCATTCTACTAATTGTTGTGAGTTCAGCTGCGTTTGTGGTCACAATGTACAATTTGGTATCACTTCTTTTGTGCGGCAGGCACGACTCAAACCAAGACCTAGAACAAACATCACCGCGCTTCGCTAGCGGAACAGTGCTGGATACTCCGAGCACCAGCGAGAGTTCGGTGGCGCATCTGATTCCGGCCTACAAGTATCGGAAAAAGATGGATGTGACAGATGAAGATGGCATTTGTGCTGTGTGCTTGGGAAGTTTTGAGGATGGTGAAGACTTGAAAATCTTACCGGAGTGCTTGCACTCTTTTCACGTACCATGCATAGATATGTGGCTCTATTCGCATTCCAATTGCCCAATTTGCCGTGCTGATGCCACGTCTTCATTGGAGATTCCTTCTCATGTGCTGGATTTCAGTTCGAGCGAATCCAACAGACGTCAGAGCCTAGAATCGCAAAATGTGGATCTTCAAAGTAGTATAGTATAA 534 0.4532 MSIPSMADKVTIATDNLTILLIVVSSAAFVVTMYNLVSLLLCGRHDSNQDLEQTSPRFASGTVLDTPSTSESSVAHLIPAYKYRKKMDVTDEDGICAVCLGSFEDGEDLKILPECLHSFHVPCIDMWLYSHSNCPICRADATSSLEIPSHVLDFSSSESNRRQSLESQNVDLQSSIV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00908 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 143 IPR013083 -
Bach4g00908 177 SMART ring_2 96 137 IPR001841 -
Bach4g00908 177 SUPERFAMILY RING/U-box 90 145 - -
Bach4g00908 177 Pfam Ring finger domain 96 138 IPR001841 -
Bach4g00908 177 CDD RING-H2_EL5-like 95 138 - -
Bach4g00908 177 ProSiteProfiles Zinc finger RING-type profile. 96 138 IPR001841 -
Bach4g00908 177 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 142 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00908 Bach-Chr4 6103066 6103599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00908 20 143 C3H Transcription Factor Family AT5G17600 38.168 6.31e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00908 - - cit:112498926 147.517