Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00900 ATGGAAGCCAACGAGATATTAGAGGAGCTACTGAATGTAGAGGTTGAGATTCAAGATGTTGAAGATCAAATAAAGGTGCTCGTTGAAAGGCAAGAGAAGCTGCATGAGAAAAAATCCGATCTCCAAGCTATACTGGAAGCATGTAAAGAATCTGAAAAACATGTCAACAATGGTGCTCCAAGTACTGCGGAAAATTGGTCTGGTTCATTTGAATGGGATTCTGAAGCAGATGACGCCAGGCTGAATATTTTTGGCATTTCTACATATCGTGCAAATCAAAGAGAGATAATTAATGCAATCATGAGCAGAAGAGATGTCCTGGTGATTATGGCTGCAGGTGGTGGCAAGAGTCTCTGCTATCAGCTTCCAGCTGTTCTTCGTGATGGAATTGCTCTTGTTGTCAGTCCCTTGCTTTCTTTAATTCAAGATCAGGTGATGGGTTTGTCTGCATTAGGCATTCCAGCCTATATGTTGACATCAACAAGAAGTAAGGAAAATGAGAAGTTTGTATACAAGGCTCTGGAGAAGGGTGAGGGGGAACTCAAAATATTATATGTCACACCTGAAAAGATATCAAAGAGCAAGAGGTTTATGTCGAAGCTTGAAAAGTGCCATCATGCTGGTCGTCTCTCTCTAATCTCAATAGATGAGGCTCATTGCTGTAGTCAGTGGGGCCATGACTTTCGACCTGACTACAAGAACCTGGGTATTCTCAAGACGCAGTTCCCTAATGTTCCATTGGCTGCTTTGACAGCAACTGCCACTCAAAGGGTCCAAAATGATCTGATAGAGATGTTGCATATTCCGAGATGCGTCAAATTTGTGAGCACAGTGAACAGGCCAAACCTGTTTTATATGGTACGGGGAAAGTCATCTGTTGGCAAAGTGGTTATAGATGAAATTGCTGAATTCATTCAAGAATCTTATCCAAATAATGAATCTGGGATAGTTTATTGCTTCTCCAGGAAGGAATGTGAACAGGTTGCAAAGGAGTTACGGGAGAGGGGAATTTCAGCTGATTATTATCATGCAGATATGGATGTAGGTTCTCGGGAGAAAGTACATATGCGGTGGAGCAATAACAAGTTGCAGGTGATAGTTGGTACAGTAGCATTTGGCATGGGAATCAACAAACCAGATGTGAGGTTCGTTATTCATCACAGCTTGAGTAAATCAATGGAAACATATTACCAGGAAAGTGGTCGAGCTGGTCGAGATGGACTCCCTTCTGAATGCTTACTGTACTTTAGACCTGGTGATGTCCCTCGGCAGAGTTCAATGGTCTTCTTCGAAAATTCAGGACTGCAGAATCTCTATGATATAGTACGATATTGTCAGTCCAAGAGACAATGCCGTCGAAGTGCCTTTTTCAGGCATTTTGCTGAGCCATTACAAGACTGCAATGGGATGTGTGACAATTGTGCATTTCCAAACGAGGTGAAGGAAGTAGATGTCTCTAGTCATGCAAAACTGGTGGTTTCTTTATTGAAAGATATAGAAGAGAATGACCAGAGGTTAACAATGTTGCAATTGGTTGACAAAATGAAAATAAAGCAGAAGGAACTAGGTTCTGACTTGAAAAAAGAGGAAATAGAGCAGCTCATTATACAGCTTTTATTAGAGCGGGTTTTGAAAGAAGAATATCAGCATACAGCTTATGCTACAAATGCTTATGTAGCCTTGGGGCCATTAGCCAAGCAAATATTGCAAGGGAAGAAGACTGTGAAGCTTGAGATTTCTAGTGATCGTAGAACTAAGGTGGGTGTGAGATCAGCTAAGCGTTCCCTTGGGTCCTCTGGTTTGGAGCTAAAGCTTGATGAGCTGCGGAAAGAGTTGTCTGCCATTCATGGAGGGATACTTCCACATTCTGTTTTGTCTACTCAACAAATCAGCTTAATAAGTTCTGAAAAGCCAAATTCACTTGAACAGTTGGAAAAGATTATTGGAAAATTGAAGACGGCGAAGTATGGAAATAGAATACTTGAGCATGTTGAAAAGTATTCTGATTTCAAGCCACCTGATGATACAAATGAACAAGGAACTGGTGTTAGTGCTGCTAAGAGGTCAAGGACCAAGAAAGCTCTCGTTGTTATCGAGAGTAGTGAAGATGAAGCTTGA 2118 0.4141 MEANEILEELLNVEVEIQDVEDQIKVLVERQEKLHEKKSDLQAILEACKESEKHVNNGAPSTAENWSGSFEWDSEADDARLNIFGISTYRANQREIINAIMSRRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLSALGIPAYMLTSTRSKENEKFVYKALEKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPLAALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVRGKSSVGKVVIDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVGSREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFFENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQDCNGMCDNCAFPNEVKEVDVSSHAKLVVSLLKDIEENDQRLTMLQLVDKMKIKQKELGSDLKKEEIEQLIIQLLLERVLKEEYQHTAYATNAYVALGPLAKQILQGKKTVKLEISSDRRTKVGVRSAKRSLGSSGLELKLDELRKELSAIHGGILPHSVLSTQQISLISSEKPNSLEQLEKIIGKLKTAKYGNRILEHVEKYSDFKPPDDTNEQGTGVSAAKRSRTKKALVVIESSEDEA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00900 705 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Bach4g00900 705 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 297 446 IPR001650 -
Bach4g00900 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 423 IPR027417 -
Bach4g00900 705 FunFam ATP-dependent DNA helicase 280 476 - -
Bach4g00900 705 CDD SF2_C_RecQ 280 416 - -
Bach4g00900 705 Coils Coil 3 37 - -
Bach4g00900 705 CDD DEXHc_RecQ1 71 279 - -
Bach4g00900 705 FunFam ATP-dependent DNA helicase 480 580 - -
Bach4g00900 705 ProSiteProfiles HRDC domain profile. 595 674 IPR002121 GO:0003676
Bach4g00900 705 FunFam ATP-dependent DNA helicase 599 669 - -
Bach4g00900 705 Pfam RQC domain 481 585 IPR018982 GO:0006260|GO:0006281|GO:0043138
Bach4g00900 705 Gene3D - 12 279 IPR027417 -
Bach4g00900 705 Gene3D - 480 581 IPR036388 -
Bach4g00900 705 MobiDBLite consensus disorder prediction 668 691 - -
Bach4g00900 705 SMART RQC_2 484 581 IPR018982 GO:0006260|GO:0006281|GO:0043138
Bach4g00900 705 SMART ultradead3 85 288 IPR014001 -
Bach4g00900 705 Gene3D HRDC domain 599 668 IPR044876 -
Bach4g00900 705 FunFam ATP-dependent DNA helicase 46 279 - -
Bach4g00900 705 Pfam Helicase conserved C-terminal domain 303 406 IPR001650 -
Bach4g00900 705 SMART helicmild6 326 407 IPR001650 -
Bach4g00900 705 Pfam HRDC domain 604 662 IPR002121 GO:0003676
Bach4g00900 705 PANTHER DNA HELICASE RECQ FAMILY MEMBER 64 653 - -
Bach4g00900 705 Pfam DEAD/DEAH box helicase 91 259 IPR011545 GO:0003676|GO:0005524
Bach4g00900 705 Gene3D - 280 476 IPR027417 -
Bach4g00900 705 Pfam RecQ zinc-binding 419 475 IPR032284 -
Bach4g00900 705 NCBIfam RecQ family ATP-dependent DNA helicase 82 513 IPR004589 GO:0004386|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00900 Bach-Chr4 6016884 6026752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00900 315 421 Eukaryotic Initiation Factors Gene Family AT3G19760 20.561 7.71e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00900 4 6016884 6026752 Bach4g00900 4 6016884 6026752 ECH