Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00889 ATGAAGGAACCAAAAAAGGCATGGAGGCCATTCACGGCAAAGTACTGCTGCTCCACTGAGGACCAAACCATCTTTGGAAACTTGAGCCGCGCCTGCAGGCCCTCGCGTTCTGATTTCTCTAAGGACATAGCGCCGTTGCCTTCGTTTCGGAGATTGTCCTTCTCTGATCTTAGCCGTTCATCTTCGACGCGAATCAATGAAGATCTTGCTCAGTCTTTTGGTTCGGATTTGTATGATTTTCAGCTGAGCGAGTTGCGTGCCATAACCCAGAATTTCTCGAGCAATTACTTGTTGGGTGAAGGTGGGTTTGGAACGGTGCATAAGGGTTATACAGATGATAACTTGAGGCAGGGCTTGAAAGCTCAGCCAGTTGCAGTTAAGCTTCTCGATATTGAAGGCTTACAAGGACATCGCGAATGGCTTGCAGAAGTAATATTTCTCGGGCAGCTGAGGCACCCCAATTTGGTCAAATTGATAGGGTACTGTTGTGAGGATGAAGAACGGCTCCTTGTATACGAATTCATGCCTCGAGGAAGCCTGGAGAATCACCTCTTCAGAAGGATAACATCACTGCCATGGGCTACAAGATTAAGAATTGCCACAGGTGCAGCAAAAGGCCTTGCCTTTTTGCATAATGCTGAGAACCCTGTCATATACCGTGACTTCAAGACCTCAAATGTCTTGCTTGATTCAGATTTTACTGCCAAACTGTCAGATTTTGGATTAGCAAAAATGGGTCCAGAGGGATCAAACACCCACGTTACAACAAGGGTCATGGGCACCTATGGATATGCAGCCCCAGAATATATCTCAACAGGGCACTTAACCACCAAAAGCGATGTCTATAGCTTTGGGGTAGTCCTGCTAGAACTTCTCACAGGAAGGAGGGCAATGGACAAGACAAAACCAAAGACACAGCAAAACCTTGTGGATTGGACAAAACCTTACTTGAGTAGTAGTAGGAGACTAAGACATATTATGGACCCAAGGCTTGCAGGGCAATACTCTGTAAAGGGTGCAAAGGAGATGGCAGTTTTGGCATCGCAATGCACAAGTTTGAATCCTAAAGATAGGCCAAGGATGCCAGCTATTGTGGAGACTCTTGAGAGCCTGGAACAGTTCAAGGACATGGCAGTTACCTGCGGACACTGGCCAGCATCGCCGAAATCTAGGAATGGAGCTTCCAATAAGGTCAGAATTGATATCAGAGCTGGTGCAACTGCAACACACAGGAAACCCTCTTCTGTAGTTGCAAGCAAAAACACTTGA 1269 0.4657 MKEPKKAWRPFTAKYCCSTEDQTIFGNLSRACRPSRSDFSKDIAPLPSFRRLSFSDLSRSSSTRINEDLAQSFGSDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYTDDNLRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRITSLPWATRLRIATGAAKGLAFLHNAENPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMDKTKPKTQQNLVDWTKPYLSSSRRLRHIMDPRLAGQYSVKGAKEMAVLASQCTSLNPKDRPRMPAIVETLESLEQFKDMAVTCGHWPASPKSRNGASNKVRIDIRAGATATHRKPSSVVASKNT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00889 422 SUPERFAMILY Protein kinase-like (PK-like) 72 369 IPR011009 -
Bach4g00889 422 ProSitePatterns Protein kinases ATP-binding region signature. 98 127 IPR017441 GO:0005524
Bach4g00889 422 Gene3D Phosphorylase Kinase; domain 1 54 174 - -
Bach4g00889 422 Gene3D Transferase(Phosphotransferase) domain 1 175 382 - -
Bach4g00889 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Bach4g00889 422 ProSiteProfiles Protein kinase domain profile. 92 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00889 422 FunFam Serine/threonine-protein kinase PBS1 175 381 - -
Bach4g00889 422 Pfam Protein tyrosine and serine/threonine kinase 97 368 IPR001245 GO:0004672|GO:0006468
Bach4g00889 422 CDD STKc_IRAK 98 371 - -
Bach4g00889 422 PANTHER OS01G0588500 PROTEIN-RELATED 63 372 - -
Bach4g00889 422 FunFam Serine/threonine-protein kinase BIK1 58 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00889 Bach-Chr4 5962251 5964488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00889 80 408 Glycoside Hydrolase AT3G07070 48.657 4.62e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bach4g00889 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00889 - - gmx:100814241 708.753