Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00880 ATGGGATCTAGTGGTAGCAAAGCCACTTCTTCTTGTGGTTCATCGCCTTCATCGTCGTCTTCGGGCAGTTTTCGGAAGGGTCGATCTAAGGGGAACAGAGGATTCCAATCCTATTGTCTGGGAACAACTTCTGGATTTCATGATTGTGATAATGATGACCAGGCTTGTGATCATGATAAAGTAAATGGAGGTAATGACATATGCATCGATCGCAATGAAATAGACTCAGATGAGGTGAAAATAGAGTCCTTTGGAAATATGAAGTCCAAGAAATCTGATGAAAGGCCTTGTATGCCTTCTAACATTGAGCTTGATGAGTGGGGTCAAACAAGCATACACAGTGCTGCATCAAGAACTGGTAGCAGTTCTGCTCGTGCTTCATCAATTGAGTCCTTGAACCCTTCAAGCCGATTCCTTTCTCGGTTTAGCCTCACTCCTGGTAATATAAGCTTCAGACTAAGTAGAACAACCAGTTTGGGGTCATCAAAGCATTGCCATGTTTCTTCTTCAAGTTTCTCAATGTGTAACAATGATGACGAGCTTCATTTGCATCCCGGATCAACTGGCAGCTTGGTCAATAGAAATGACACTCGACATTGTAGTGACTTGCTTCCGGCATCTTTTGCTAATCGTATGCCTACAGATACTTCCAATAACTTAAGGACTAATGCCCTAGCATCAGGTTCGTCTGGTAACTCGCTGAACAATCCAACAGTTTCTCCGATTCAGGATGTTGTTACAGATGGAGGTGGGGCAAGAGAAGGGTTGGATGTGAACTTGTATTCTCCAAGACTTCAGTGTGGAACAGAAAATATCGAGACTAGAAATATTGATCGACAGAATGGAGCTCGAGAACCTGTTGAACGGAATGTTCGATTTAGCCGAACTCTAAGTGTTGGCAGGCTTCGTGATAGAGTTCTTCGTCGATCATCATTGTCTGACTTCACCTTTTTCCCTCTTCAACAAGAAAGAGAAGGAAGAGATGCTAGTCAAAATGGTCAAAGACAAGCAAGGGAGGCTGATTCAAGAGTATCTGATAGTAATGCTGTAAATTCTCCTTCTACATCTGAATATCCTCCATCCAGTATGTCTAGTTCCTTGTTCAGCATCCAAGATTCTGAGATTGAGCCTTCACGACCAAGAGAAGCTAGATATCAGGATCTACTGGAACATCGGTCCAATTTCCTTGAACGGAGAAGACGAATACGGTCTCAGGTCCGAGCTCTTCAGCGGTTGGGAAGCCGGTTTGAAAACTTGTCTGGTCATGACAGATCATGCATATTGTCGGGTCAACATAGAAATGGCCGTTGTACGTGCCGTATTAGCAGTCGTGAGGGCCATCTAAATGATGATACCAGTGCTAGAGCAAGCATATCAAGAATTGTTATGCTGGCAGAAGCCTTATTCGAGGTTCTGGATGAAATTCACCAGCAATCTGTCGTTTTATCTTCCCGCCCCTCTGTGTCTTCTATTGGATCTGTTCCTGCACCTAGTGAAGTTGTGGAGTCCTTGCCTGTCAAATTATACACGAAGTTGCATAAACATCAAGAGGATGCTGCACAATGCTATATATGTCTTGTGGAGTATGAGGATGGTGACAGCGTGCGGGTGTTGCCGTGCCATCATGAATTTCATAGAACATGTATAGACAAGTGGCTTAAGGAGATTCATCGGGTATGCCCATTATGCAGGGGAGACATCTGCATGTCAGATTCACTGCCAACGGAGAACTAA 1734 0.44 MGSSGSKATSSCGSSPSSSSSGSFRKGRSKGNRGFQSYCLGTTSGFHDCDNDDQACDHDKVNGGNDICIDRNEIDSDEVKIESFGNMKSKKSDERPCMPSNIELDEWGQTSIHSAASRTGSSSARASSIESLNPSSRFLSRFSLTPGNISFRLSRTTSLGSSKHCHVSSSSFSMCNNDDELHLHPGSTGSLVNRNDTRHCSDLLPASFANRMPTDTSNNLRTNALASGSSGNSLNNPTVSPIQDVVTDGGGAREGLDVNLYSPRLQCGTENIETRNIDRQNGAREPVERNVRFSRTLSVGRLRDRVLRRSSLSDFTFFPLQQEREGRDASQNGQRQAREADSRVSDSNAVNSPSTSEYPPSSMSSSLFSIQDSEIEPSRPREARYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRISSREGHLNDDTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPSEVVESLPVKLYTKLHKHQEDAAQCYICLVEYEDGDSVRVLPCHHEFHRTCIDKWLKEIHRVCPLCRGDICMSDSLPTEN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00880 577 MobiDBLite consensus disorder prediction 1 31 - -
Bach4g00880 577 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 485 569 IPR013083 -
Bach4g00880 577 MobiDBLite consensus disorder prediction 343 373 - -
Bach4g00880 577 MobiDBLite consensus disorder prediction 323 381 - -
Bach4g00880 577 FunFam Putative RING zinc finger domain superfamily protein 491 569 - -
Bach4g00880 577 MobiDBLite consensus disorder prediction 1 27 - -
Bach4g00880 577 MobiDBLite consensus disorder prediction 328 342 - -
Bach4g00880 577 ProSiteProfiles Zinc finger RING-type profile. 522 564 IPR001841 -
Bach4g00880 577 Pfam Ring finger domain 521 564 IPR001841 -
Bach4g00880 577 SMART ring_2 522 563 IPR001841 -
Bach4g00880 577 SUPERFAMILY RING/U-box 500 570 - -
Bach4g00880 577 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00880 Bach-Chr4 5909262 5912467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00880 234 571 C3H Transcription Factor Family AT5G45290 61.159 7.09e-123 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00880 - - gmx:100815830 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00880 4 5909262 5912467 Bach4g00880 4 5909262 5912467 ECH