Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00879 GAAAATTGTTATGCAGCAGCAGCAACAAGATGAACAGCATCAACGACGATACTTCTAGACAAGATCTGGACCCTCAAAGTGACCATAGCTCCGATTACTTAACTCACCCTCACCCTCAGCCCCATCTTCTTCAACCCCAGCCTCAGCCACAATCTCAGCCTCAGCCTCGGCGCCCTCGTGGCTTCGCTGCCACGGCGGCAGCTACGGCAGCTTCAACCGGAAAGGGAAAGAAAGAGAGAGAAAAGGAGAAGGAGCGTACCAAGCTCCGAGAGCGCCATCGTCGAGCAATTACGAGCCGTATGCTCGCGGGGCTTCGTCAGTATGGTAATTTTCCTCTCCCGGCACGTGCTGACATGAATGATGTACTCGCCGCGCTCGCACGTGAGGCTGGTTGGGTTGTGGAGGCCGATGGAACCACCTACAGGCAGTGTCCACCTCCTTCTCAAATGGCATCGTTTGCGGCAAGGTCAGTTGAAAGCCCACTCTCTGCTGGTTCTTTGAGAGCTTCCTCTGTGAAAGAGTCATTAGAGAGTCAGCCTCCGGTACTTAGAATTGATGAAAGCTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCAGAAAGGGACTCGAAAAGTGAGAAATACGCAAGTGCAAGCCCCATCAATTCAGTTGACTGCTTAGAGGCTGATCAGCTTATGCAGGATATTCATTCTGGGGAGCATGAGAACGATTTTACAGGAACACCGTATATTCCTGTTTATATAAAGCTTGCTGCTGGTATCATCAACAAGTTCTGCCAGTTGATTGATCCTGAAGGCATTAGACAGGACCTTATCCATTTGAAGTCTTTAAATCTAGATGGTGTCATTGTGGATTGTTGGTGGGGCATTGTTGAAGGATGGAGCCCGCAGAAATATGTGTGGTCTGGCTATAGGAAACTTTTTAACATCATTAGAGAATTCAAGCTGAAGTTGCAGGTTATTATGGCATTTCATGAATGCGGAGGGAATGATTCCACTGATACATTAATTTCCCTTCCTCAATGGGTTTTGGAGATTGGAAAAGAGAACCAGGATATATTCTTCACAGATCGTGAAGGACGTAGGAATACTGAAAGTCTTTCTTGGGGTGTTGACAAAGAGCGAGTTCTCAAGGGAAGAACGGGAATTGAGGTTTACTTTGATTTTATGAGAAGCTTTCGGACAGAGTTTGATGACTTATTTGCTGAAGGTCTCATTTCTGCTGTTGAAATTGGACTTGGAGCTTCAGGAGAGCTCAAATATCCTTCCTTTTCAGAAAGAATGGGGTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTACGATAAATACCTACAACAAAGTCTACGCAGAGCAGCTAAATTACGTGGTCACTCTTTTTGGGCTAGGGGACCTGATAATGCTGGATACTACAATTCTATGTCACATGAAACTGGGTTCTTTTGTGAGCGAGGTGATTATGACAATTATTATGGGCGCTTCTTCTTACATTGGTATGCCCAGTCGTTAATAGATCATGCAGATAATGTTTTGTCTCTTGCGAGCCTTGCATTTGAAGAGACAAAATTAATTGTCAAGGTTCCTTCAATATACTGGTGGTACAAGACTTCTAGTCATGCAGCAGAGTTGACTGCAGGATATCACAACCCTACTAACCAGGATGGATACTCTCCTGTTTTTGAGGTTCTGAGAAAACATTCTGTCACCATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAATCAGGAAGCAGATGAATCATTGGCGGACCCGGAGGGTTTGAGTTGGCAGGTTTTAAACTCGGCTTGGGATCGAGGACTGACAGTGGCTGGAGAGAATGCACTCCTGTGTTATGATAGAGAAGGGTACAAGAGATTGGTTGAGATGGCTAAGCCTAGAAATGATCCCGATCGTCGCCACTTCTCATTCTTCGTGTTCCAACAGCCATCTTTGGTTCAGGGGAACATTTGCTTGTCAGAGTTGGATTACTTCATCAAATGCATGCATGGTGAGCTGGCAGGTGATCTATGATGGTTGCAAATTTTAACTTAAGCCCATTTTTAAGGGCATAG 2074 0.4542 MNSINDDTSRQDLDPQSDHSSDYLTHPHPQPHLLQPQPQPQSQPQPRRPRGFAATAAATAASTGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSQMASFAARSVESPLSAGSLRASSVKESLESQPPVLRIDESLSPASIDSVVIAERDSKSEKYASASPINSVDCLEADQLMQDIHSGEHENDFTGTPYIPVYIKLAAGIINKFCQLIDPEGIRQDLIHLKSLNLDGVIVDCWWGIVEGWSPQKYVWSGYRKLFNIIREFKLKLQVIMAFHECGGNDSTDTLISLPQWVLEIGKENQDIFFTDREGRRNTESLSWGVDKERVLKGRTGIEVYFDFMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQQSLRRAAKLRGHSFWARGPDNAGYYNSMSHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETKLIVKVPSIYWWYKTSSHAAELTAGYHNPTNQDGYSPVFEVLRKHSVTMKFVCLGFQLSNQEADESLADPEGLSWQVLNSAWDRGLTVAGENALLCYDREGYKRLVEMAKPRNDPDRRHFSFFVFQQPSLVQGNICLSELDYFIKCMHGELAGDL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 269 283 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 585 607 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 478 497 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 290 308 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 312 333 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 547 570 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 405 427 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 512 528 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 529 540 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 Pfam BES1/BZR1 plant transcription factor, N-terminal 64 211 IPR008540 -
Bach4g00879 667 MobiDBLite consensus disorder prediction 1 84 - -
Bach4g00879 667 SUPERFAMILY (Trans)glycosidases 229 662 IPR017853 -
Bach4g00879 667 MobiDBLite consensus disorder prediction 31 45 - -
Bach4g00879 667 Pfam Glycosyl hydrolase family 14 254 627 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 171 661 IPR001554 GO:0000272|GO:0016161
Bach4g00879 667 Gene3D Glycosidases 225 666 - -
Bach4g00879 667 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00879 Bach-Chr4 5901930 5907182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00879 34 663 Glycoside Hydrolase AT5G45300 66.267 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Bach4g00879 Glyco_hydro_14 1e-86 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00879 K01177 - gmx:100777004 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00879 4 5901930 5907182 Bach4g00879 4 5901930 5907182 ECH