Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00875 ATGTGTGGCATTGGTATGAATCAATTCACAGGTCCTATCCCGAGATCTATCACCAATGCATCTGTTCTTCAATTATTTGATATACCGATAAACCGCTTTGTGGGACAAGTTCCAAGTCTAGGAAATCTTCAGGATCTTTGGTGGCTGGATCTGAGTGCTAATCATCTAGGTAATAATTCAGATAGTGATTTGGATTTTATTACATCTTTGACAAACTGCAGCAATTTGGGATATCTGGTTTTGAATTTAAATAACCTTGGGGGCCATTTACCCAACTCTTTAGGCAATTTATCAACCCAACTCAGTCGACTATATCTTGGTAATAATCAGATATATGGAACTGTTCCTGCTACCATAGGAAATTTCATCAACTTAATTGCCTTGGACTTGGGAAATAACCATTTTGTTGAGAGCATTCCAGTCACTTTTGGGATGCTTCAAAAGCTGCAAGTATTAACCTTGAGTGTAAACAAACTGTCAGGAATGATACCAGCCTCTATAGGCAATCTCAGTCAATTGTCTCAACTGGACCTGTCACAGAACATGCTAGAAGGAAATATTCCACCAAGTGCTGGAAATTGCAAAAATTTACAGTACCTGGATCTCTCAAAAAACAACCTTAGTGGAGTTATACCCTTAGAAATTATGGGTCTTTCCTCTCTATCAATTCTTCTGAACTTGTCACAAAACTCATTAAGTGGCAGTCTGCCTGCTGAGGTGGGCAGGCTAAGAAACGTTGGTAAGTTGGATATCTCTGAAAATCATCTATCCGGTGACATTCCTGGAACTATTGGAGATTGCATAAGCTTGGAGTACCTTTATTTACAAGGAAATTCCTTCAATGGAATCATACCTTCGTCTTTGGCTTCATTGAGAGGTCTTCGATTTTTGGACCTCTCACGAAATAACTTGTCCGGATCAATCCCAGAAGGTCTGCAAGATATTCCTGATTTGGAATACTTGAACCTTTCTTTCAATATGTTGGATGGTGAAGTACCAAAAGAAGGTGTGTTTAGAAATGCAAGTGCAATTTTTGTGACTGGCAATACAAATCTATGTGGAGGTTTCTCAGAGCTACATCTAGCAACCTGCCCCATCAAAGCTCAGAAACACAAAAATGATCAGACTTGGAAGCTAATAGTGGTAACAGTAGGTGTAGCCGTCTGTGTCCTTCTTTTGTCCATATCTGTTGCTGTTTGCTGGATGAGGAAAACTAACAGGATTCGCTTATCATCATTTACTTCATTGACAGTTGACAAGCTCTCTAAAATTTCATACCAGAGGCTTCACCAAGTAACCAATGGATTCTCTGCCAGTAACATGGTTGGATCTGGTAGCTTTGGTGTTGTGTATAGAGGAATTTTAGAGTCAGAAGATAGGGTTGTTGCTATAAAAGTCTTCAACCTTGAGAAGACAGGAGCTCACAAGAGCTTCAGTGCTGAGTGCAATGCGCTCAAAACCATCCGGCACAGGAATCTTGTTAAGATTTTAACGTGTTGCTCTAGTCTAGACTACAAGGGCCAGGAATTCAAAGCTCTAGTTTTTGACTACATCTCAAATGGAAGCTTGGAGAAATGGTTACATCCAGAGGCAGATCAGCAAAGGATTCTGGACCTTCTTCAAAGGTTAGCTACTGTTATGGATGTTGCTTCTGCTATACGCTACCTTCACCATGAATGCGAGCCACCAGTTATTCACTGTGATTTAAAGCCATGTAATGTTCTACTTGATGATGACATGTCCGCTCATGTATGTGACTTTGGATTAGCAAGAGTTCTCTCAACTATCAATGGCATCTCTCATAAGCAAACCAGCACAATAGGAATAAAAGGAACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTGGTGAGGTTACTACAAGAGGTGATGTATATAGCTTTGGAATTCTTGTTTTGGAAATGCTTACTGGAAGGAGACCCACAGATGAAATGTTTACAGCTGGTGTCAATCTCCACATCTATGTGAAGCAAGCGTGGCCAAATAAACTTATGCAAATTGTGGACCCAACCCTTCTCGAAAGAGAAATAGAGCATGCAGAGGCAGAAGAAGCTGATCACACAAGTGACCATGGCTATGATCGAATCGAGGGAAGGGAGCAGAAAAGCAGGGATAAGGTGCAAGACTGTCTACTTTCACTCTTTCGGATTGGACTTGCTTGTTCAGCAGAATCACCAAAAGACAGGAAAAACATGGCGGACGTCACCAGGGAACTAGATGAAATAAAATATGCCTTCATTTCGAATGGGATCAATGCAGAAAGGCCACACATCACAATATAA 2304 0.4084 MCGIGMNQFTGPIPRSITNASVLQLFDIPINRFVGQVPSLGNLQDLWWLDLSANHLGNNSDSDLDFITSLTNCSNLGYLVLNLNNLGGHLPNSLGNLSTQLSRLYLGNNQIYGTVPATIGNFINLIALDLGNNHFVESIPVTFGMLQKLQVLTLSVNKLSGMIPASIGNLSQLSQLDLSQNMLEGNIPPSAGNCKNLQYLDLSKNNLSGVIPLEIMGLSSLSILLNLSQNSLSGSLPAEVGRLRNVGKLDISENHLSGDIPGTIGDCISLEYLYLQGNSFNGIIPSSLASLRGLRFLDLSRNNLSGSIPEGLQDIPDLEYLNLSFNMLDGEVPKEGVFRNASAIFVTGNTNLCGGFSELHLATCPIKAQKHKNDQTWKLIVVTVGVAVCVLLLSISVAVCWMRKTNRIRLSSFTSLTVDKLSKISYQRLHQVTNGFSASNMVGSGSFGVVYRGILESEDRVVAIKVFNLEKTGAHKSFSAECNALKTIRHRNLVKILTCCSSLDYKGQEFKALVFDYISNGSLEKWLHPEADQQRILDLLQRLATVMDVASAIRYLHHECEPPVIHCDLKPCNVLLDDDMSAHVCDFGLARVLSTINGISHKQTSTIGIKGTVGYAPPEYGMGGEVTTRGDVYSFGILVLEMLTGRRPTDEMFTAGVNLHIYVKQAWPNKLMQIVDPTLLEREIEHAEAEEADHTSDHGYDRIEGREQKSRDKVQDCLLSLFRIGLACSAESPKDRKNMADVTRELDEIKYAFISNGINAERPHITI 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00875 767 SMART serkin_6 436 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00875 767 SUPERFAMILY L domain-like 99 354 - -
Bach4g00875 767 Gene3D Transferase(Phosphotransferase) domain 1 518 756 - -
Bach4g00875 767 PRINTS Leucine-rich repeat signature 291 304 - -
Bach4g00875 767 PRINTS Leucine-rich repeat signature 197 210 - -
Bach4g00875 767 Pfam Leucine Rich Repeat 196 214 IPR001611 GO:0005515
Bach4g00875 767 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 518 758 - -
Bach4g00875 767 FunFam LRR receptor-like serine/threonine-protein kinase EFR 408 517 - -
Bach4g00875 767 SUPERFAMILY Protein kinase-like (PK-like) 417 746 IPR011009 -
Bach4g00875 767 CDD STKc_IRAK 442 749 - -
Bach4g00875 767 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Bach4g00875 767 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Bach4g00875 767 Pfam Protein kinase domain 439 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00875 767 SMART LRR_typ_2 315 340 IPR003591 -
Bach4g00875 767 SMART LRR_typ_2 218 243 IPR003591 -
Bach4g00875 767 SMART LRR_typ_2 122 145 IPR003591 -
Bach4g00875 767 SMART LRR_typ_2 291 314 IPR003591 -
Bach4g00875 767 SMART LRR_typ_2 146 169 IPR003591 -
Bach4g00875 767 SMART LRR_typ_2 170 194 IPR003591 -
Bach4g00875 767 ProSiteProfiles Protein kinase domain profile. 436 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00875 767 ProSitePatterns Protein kinases ATP-binding region signature. 442 465 IPR017441 GO:0005524
Bach4g00875 767 Gene3D Phosphorylase Kinase; domain 1 396 517 - -
Bach4g00875 767 PANTHER OS04G0122200 PROTEIN 5 750 - -
Bach4g00875 767 Gene3D Ribonuclease Inhibitor 3 364 IPR032675 -
Bach4g00875 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Bach4g00875 767 ProSiteProfiles Leucine-rich repeat profile. 196 217 IPR001611 GO:0005515
Bach4g00875 767 FunFam LRR receptor-like serine/threonine-protein kinase EFR 62 370 - -
Bach4g00875 767 SUPERFAMILY L domain-like 7 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00875 Bach-Chr4 5886102 5888530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00875 4 754 Receptor kinase-like Gene Family AT3G47570 46.265 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach4g00875 Pkinase 8.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00875 - - qsa:O6P43_025027 927.161