LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00856	CTTTTCCCCTCTATCTCTCTCGCAACTCACTCAAGCTTTTCCTTTCAATCACCACACTACACAGGCATGCCCACTCTCACACCCTGATCTCGTCACTGCAACATCAACTGCCACTGATTGTTCCTTCTTCGTCCCTGAATCTCAGCGGTGTCAGCTCTCTACTCTATATTCGCTGGTTCCGTTCTGGGTCGGATTGACAACCCCTTATCAAAATAACTATGCAAGGCAATGCTACGCATTCTTCAACTACCAACCCATAAGTTGAATCTGAAATTACTGTATCCCTTTTGCTGTGATTCCAAGAGGAAAAAGATATGGTCTTTGGTAAAATTGCGGGAATTTTATCTTCTGCATCGAGTATATTGTCAACCCCTCAATCCTCTGCTACTGCCCTGCCTCAGGCTGCGTCCTCTCTTGGTTTTGGATTTGTCAATCCATCTTCACACAAGAACAATCTACGAATCTCTTCATCTCTCCAGGATCTCTCTTCCTATCGCCGTTGTGATCCAGAAGATGGCGATGTGGGTATTGGGATTGATGTGCGTTCCACCCATTTAAAGCAGCCTCATTTTCATCTGCTGAGAGAAAATGGTGGTGGCTCGAGTTTCTCTAAGGAGAAGCCGGTTCAAGGGGGCAGCCCATCTTTTCGGAAGAAGAAGTGGGTCAGAGCTATCACCCTTTCACTGTGCCTTATATTGCTTGCTTTTCTAATATACTCGATTTCTATGCTTATTTATTCTTATTGGAATCAAGGATCAGGCAAATATTATATTGTACTTGATTGCGGGAGTACTGGCACTCGAGTTTATGTATATCACGCTTCTTTTGAACACAAGGGAGATAGTAATCTTCCAATAACTATCAAATCATTAAGAGATGGTCTCCAGAAGAAACCTAGCTCCCAGAGTGGACGTGCATATGATCGAATGGAGACTGAACCTGGGCTTGATAAGTTGGTATATAATCTGACTGGTTTAAAGACTGCAATAGAACCATTGGTTAGATGGGCACAGAAGCAAATACCACAGCATGCTCACAAGAGTACTTCTCTGTTTCTATATGCTACTGCTGGTGTCCGGAGGCTTCCAAGTGCTGAGTCGAAATGGTTGCTAGATAATGCTTTGTCTATATTGAAGACTTCTCCTTTCTTGTGCCAGAAGGATTGGGTCAAGACTATCTCTGGCACAGAAGAGGCTTACTATGGATGGATAGCCCTCAACTACCATAGTGGCATCTTGGGTTCTAGACCAAGAAAAGCAACATATGGTGCGCTTGATTTGGGTGGCTCATCATTACAGGTTACATTTGAGAGTGATCGACAACTGAATAGTGAGACCAGCTTATATGTTAGGATTGGATCAGTGAACCACCATCTCACTGCATATTCTCTCGCAGGCTATGGTCTAAATGAGGCTTTTGGCAAGTCTGTGGTTCATCTTTTTAAGAAAGAGTTTGGATCCACGAAAGCAGATCTAGCTAAGCAGAAAATAGAACTTAAACATCCTTGCTTGCAAACTGGGTACAAAGAGCAATACATGTGCTCTCATTGTTCTTCCATTCAGCAGGAAGGTGGTAGTCCTATGATTAATGGACAAAATTCAGGTAAAAAAGGACAATCGGGAGTTCCAGTGGTGCTTGTTGGTGCTCCAAATTGGCAAGAATGTAGTGCACTCGCAAAAATAGCTGTGAATTTGTCTGAATGGTCCAATCTCAGTCCGGGACTTGATTGTGACGTACAACCTTGTGCTCTACGTGATAATATCCCTCGCCCATATGGCCACTTTTATGTGATTTCCGGATTTTTTGTGGTTTATCGGTTTTTCAACCTGACTTCTGAAGCCACACTTGATGATGTATTGGAAAAGGGTAGGGATTTCTGTGAGAAAAGATGGGAGGTTGCAAAGAAAAGTGTTGCTCCGCAGCCCTTTATTGAGCAATACTGCTTTAGGGCACCATATATTGCGTCACTGCTGAGAGAGGGTTTGCACATTACAGATAACCAAATTACTGTTGGGTCTGGAAGTATTACTTGGACGCTTGGGGTTGCCTTGTTGGAAGCTGGGAAGGGATTTTCCGCAAGATTTGGGCTTCACAATTTGGACTTGCTCCAGAAGAAGATTAATCCTATTATTCTTATTCCCATTTTATTACTTTCCTTGTGTCTCGTGCTTTTTGCATTATCATATGTTGGCAATTGGATACCTAGATTTTTCCGGAGGTCATATCTTCCACTCTTCAGGCATAACAGTGTGTCTAGTGCATCAGTTCTTAATATCCCATCTCCTTTTCGGTTCCAGCGGTGGAGTCCAATCAATTCTGGGGATGGAAGAGTAAAGACACCACTTAGCCCAACAATTGCAGGCACTCAACAAAGTCCTTTTGGCATGGGTTATGGCCTTGGTGACAACAACAGCGGCATCGGGCTTATGGAATCTTCCTTGTACCCATCAGCTAGTAGTGTCTCACATAGTTATTCCTCATGTAATTTAGGGCAGATGCAATTTGACAGCAGTGGTATGGGTACCTTCTGGTCCCCTCACAGAAGCAAGATGCGTCTACAGAGTAGGAGATCGCAATCTCGAGAAGACCTAAATTCTTCACTGGCTGAGGCACACATGGTGAAGGTTTAA	2630	0.4357	MVFGKIAGILSSASSILSTPQSSATALPQAASSLGFGFVNPSSHKNNLRISSSLQDLSSYRRCDPEDGDVGIGIDVRSTHLKQPHFHLLRENGGGSSFSKEKPVQGGSPSFRKKKWVRAITLSLCLILLAFLIYSISMLIYSYWNQGSGKYYIVLDCGSTGTRVYVYHASFEHKGDSNLPITIKSLRDGLQKKPSSQSGRAYDRMETEPGLDKLVYNLTGLKTAIEPLVRWAQKQIPQHAHKSTSLFLYATAGVRRLPSAESKWLLDNALSILKTSPFLCQKDWVKTISGTEEAYYGWIALNYHSGILGSRPRKATYGALDLGGSSLQVTFESDRQLNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFGKSVVHLFKKEFGSTKADLAKQKIELKHPCLQTGYKEQYMCSHCSSIQQEGGSPMINGQNSGKKGQSGVPVVLVGAPNWQECSALAKIAVNLSEWSNLSPGLDCDVQPCALRDNIPRPYGHFYVISGFFVVYRFFNLTSEATLDDVLEKGRDFCEKRWEVAKKSVAPQPFIEQYCFRAPYIASLLREGLHITDNQITVGSGSITWTLGVALLEAGKGFSARFGLHNLDLLQKKINPIILIPILLLSLCLVLFALSYVGNWIPRFFRRSYLPLFRHNSVSSASVLNIPSPFRFQRWSPINSGDGRVKTPLSPTIAGTQQSPFGMGYGLGDNNSGIGLMESSLYPSASSVSHSYSSCNLGQMQFDSSGMGTFWSPHRSKMRLQSRRSQSREDLNSSLAEAHMVKV	771

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00856	771	MobiDBLite	consensus disorder prediction	741	771	-	-
	Bach4g00856	771	PANTHER	ADENOSINE/GUANOSINE DIPHOSPHATASE	121	586	IPR000407	GO:0016787
	Bach4g00856	771	Gene3D	-	143	290	-	-
	Bach4g00856	771	Gene3D	Exopolyphosphatase. Domain 2	291	568	-	-
	Bach4g00856	771	Pfam	GDA1/CD39 (nucleoside phosphatase) family	148	580	IPR000407	GO:0016787

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00856	Bach-Chr4	5710839	5714069	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach4g00856	1	771	Nodulin-like Gene Family	AT4G19180	59.873	0.0	875

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00856	-		-	qsa:O6P43_033469	1115.91

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