Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00846 GTAAAAAGTAGACATAGCCGAGAGAGAAACAAGGATTAGGGTTTATCAAATTAACCTCTGTGAGTTCGCTTTTTCGTTGTCCTCACACCTCAATTATTTCCTCCAATTTCAATTCAGGAGATTGTTTCTCATGCGTCCTTAAAATTGGAAATGAGTGATACTAAAGAAAGTGAGAAAGCTGGACTGGACGTGCCAGAGGCTGTAGATGAAAGCCAGAAGTTGGTTGACGCACAGGTTCAACCTGAAGGTTCTCCTATTCCTGCTCCGGTAGTGGAAAATTCAAATAACGTTGAAAATGGGAAGGTAGAGGCACCTCCTCAAGATAAAAATGTGGAACCGGAGGCCATATTGGAGAAGACTCCGCATCAAAAAGTTAAAAGTTCTCTTCACTCAGTTCCAGTAGAAGATAATGCTCAAATTTCGGTTAAAGCTGATTGTGAACCCACTTCAGTAGTGAAGACCGAATTACCTCAGAGAAGTTCAGGTGTTGAGAATCATTCCATTGCTTGTGAAAATAATAGTGATGCTACTGTAACTGCCACGGTGATCAAGCCTGAAGCTTGCGAAGTGCCTGATAGTAAACCTTGCAATAATGGCGACTCCAAACCCTCAATCCATAATGAACTCACTCCGCCTCAAGTTACCCCTACTCAAACAAAAGCTGAAGTTGGGAATGGAGTTGAGAATAAGATTAGTGAAAAGCAAGTTGCTGCACCTGCTGACAATGGGAATTCAAACTCAAAGCACACGTTTTTTTTGGATGCTGACCATTCATTTGATGGCAATGAGTCAGGAACGGAAGAGGAACAATCAGCTTTCATGAAGGAGCTTGAAAATTTCTTCAGGGAGAGGAGCATGGAATTCAAACCCCCAAAGTTCTATGGAGAGGGCCTTAATTGCCTTAAGTTGTGGAGAGCTGTAACTAGATTGGGCGGCTATGATAAGGTAACTTCATGTAAGTTATGGAGGCAAGTGGGAGAGTCCTTCAAACCACCAAAAACATGCACTACAGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCACTTCTTGATTATGAAAGGCATAAAACAAAAGGTGGCGAGCTTGCTGTGCCTATTGCTTCTCATTCGGAGCCCATAAATATTGAAAATCAGGCTTCAGCATCAGGTAGAGCACCACGGAGAGATGCTGCTGCAAGGGCCATGCAGGGCTGGCACTCACAGCGTCTTCTTGGTAATGGTGAAGTTAGTGACCCTATTATAAAGGATAGGAATTCTCTTTCTATGCAAAAGCGTGAAAAGCAGCTTAAAAACATCAATTTACTTAAACGTAAGAAACCATCTTACTTGGATAATGCAGTCAAAGCAGCACGCAGCAAACCAACTAAACCACAATTGGATACAGCAGTTGTTGATATTGGACCTCCAGCTGATTGGGTAAAAGTCAATGTTCAAAAAACTAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGGGAAGAGGTGCGCGTTCAATCTGATCCAGCTGGGCGCTTGGTCATAAGTGGTGAACCAGAGCATCCTGATAATCCATGGGGTGTGACGCCTTTCAAAAAGGTTGTTAGCTTACCTTCAAGAATTGATCCTCATCAGACATCGGCCGTGGTGACCCTGCATGGACAGTTGTTCGTTCGCGTGCCATTTGAGCAGTCAGAATAGTGGTGGTTAAGGGCTGCATGACTATCCTTTACCATGGTATATAGGATTGTTAACCTTTAAGCTATTTAGAAGAATGAATTCTGCTCGGTCAAACTTAGGCAAAATTCCGAGCTCATTGGGTATATTTATGTTAGTGATATTCAGAATTTTCATGTGATTTTCTCCCGTATTCCAGTTTGACCATGTTGATATCAGTTAGTTAGGATTCCCTAATTGAGATCAT 1912 0.4231 MSDTKESEKAGLDVPEAVDESQKLVDAQVQPEGSPIPAPVVENSNNVENGKVEAPPQDKNVEPEAILEKTPHQKVKSSLHSVPVEDNAQISVKADCEPTSVVKTELPQRSSGVENHSIACENNSDATVTATVIKPEACEVPDSKPCNNGDSKPSIHNELTPPQVTPTQTKAEVGNGVENKISEKQVAAPADNGNSNSKHTFFLDADHSFDGNESGTEEEQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTKGGELAVPIASHSEPINIENQASASGRAPRRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSLSMQKREKQLKNINLLKRKKPSYLDNAVKAARSKPTKPQLDTAVVDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00846 512 SMART bright_3 218 309 IPR001606 GO:0003677
Bach4g00846 512 MobiDBLite consensus disorder prediction 147 169 - -
Bach4g00846 512 MobiDBLite consensus disorder prediction 1 20 - -
Bach4g00846 512 Pfam Hsp20/alpha crystallin family 429 511 IPR002068 -
Bach4g00846 512 Pfam ARID/BRIGHT DNA binding domain 220 304 IPR001606 GO:0003677
Bach4g00846 512 SUPERFAMILY HSP20-like chaperones 421 508 IPR008978 -
Bach4g00846 512 MobiDBLite consensus disorder prediction 139 169 - -
Bach4g00846 512 Gene3D - 412 512 IPR008978 -
Bach4g00846 512 SMART ARID_2 214 304 - -
Bach4g00846 512 Gene3D - 217 314 IPR036431 GO:0003677
Bach4g00846 512 CDD ACD_sHsps-like 427 507 - -
Bach4g00846 512 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 81 511 IPR045147 GO:0006357
Bach4g00846 512 FunFam AT-rich interactive domain-containing protein 3 404 512 - -
Bach4g00846 512 MobiDBLite consensus disorder prediction 1 60 - -
Bach4g00846 512 FunFam AT-rich interactive domain-containing protein 3 217 316 - -
Bach4g00846 512 ProSiteProfiles ARID domain profile. 217 308 IPR001606 GO:0003677
Bach4g00846 512 SUPERFAMILY ARID-like 212 321 IPR036431 GO:0003677
Bach4g00846 512 CDD ARID 219 304 - -
Bach4g00846 512 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 412 512 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00846 Bach-Chr4 5627431 5633221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00846 200 510 ARID Transcription Factor Family AT1G76510 62.025 4.74e-130 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bach4g00846 HSP20 7.3e-06 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00846 - - pcin:129284429 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00846 4 5627431 5633221 Bach10g00667 10 4697103 4701976 BWGD
Bach4g00846 4 5627431 5633221 Bach4g00846 4 5627431 5633221 ECH