Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00828 ATGCCAAGGGTAACTTTTGGTCATCAAAAAGAAAAGGGAGTCAGGGTGATACTTAGTGGATTTTCTTTGGCAACTTCAACCATGATGGGAGTTTGGCTTGTGGTCTTCATGGTTCTCTTCAATGGGTTCTCTTCAACTTGGGCTGACATGAATAATTCCACAGTACCTGATTCTGTGAATATTGGGGTTCTCTACTCTTTCAATACTACTATTGGTAAGATTTTAAAAATCGCTATAGAAGCTGCAGTTGAAGATGTAAATTCTGATCCATCAGTTCTTGGTAAAACTCAGCTGAAAATCTTAATGCAAGAGGATTCCAAGTACAGAGGTTTTCTGAGCATTGCTGAAACCTTGGAGCTCATGGCAAAGCACACGGTCGCTGTAATTGGCCCTCAATCCTCAATAACAGCTCATGTCATTTCTCATGTAGCAAATGAGCTCCAAATTCCGCTGCTATCATTCTCGGCAACAGACCCAACCCTTTCTCCACTTCAATTCCCATTCTTCATCAGAACTGCTATGAATGATCTTTTTCAGATGACAGCAATAGCAGAGCTTGTTGAATTCTATGGGTGGAGAGAGGTAATCGCAATCTATGTCGATGACGACTACGGGAGAAATGGAATCGCTTCGTTAGGGGATAAGCTTGCTGAGAGACGTTGTAAGATCTCATTTAAAGCACCAATGACCGCTGAAGCAACTAAGGAGGAGATTACTGATGTGCTCGTTCAGGTTGCTCTGGCAGAATCTCGGGTTATAGTTCTTCACATTAATACAGCTTTGGGGGCTAAGGTTTTCAGTGTGGCACATAATCTTGAGATGATGGGAACTGGGTATGTCTGGATAGCCACTATTTTCCTTTCTACTCTGCTGGATACTGCTAGTCACCTCCCTTCAGATGAAATGCACGAAATTCAAGGAGTTATTACACTACGCATGTACACACCGGAAACAGAGCTGAAAAGGAGATTTGTTGCTAGGTGGAAAAACTCGACAAGAGGAAACACTGCTCAGGGCCCCTTGGGACTGAATACTTATTGTCTCTATGCATATGATACTGTTTGGTTACTTGCTCGTGCAATGGACACATTTTTTAGAAAAGGGAATCGAATTACTTTTTCAAATGATTCAAAGTTATCTGAACTACATGGAAACAGTTTACATCTTGAAGCTTTGAACATTTTCGATGAAGGGAATATTTTGCGTAGTAGTATTTTAGGTGTCAACATGACTGGTGTAACAGGTCAAGTCAGGTATGCATCTGATGGGAACCTTGTTAATCCAGCGTATGAAGTCCTCAATGTGGTAGGGACAGGAACTCGAAGGATTGGTTATTGGTCTAATTACTCTGGGTTATCAGTTGTTACTCCAGAATCACTTTATTCAAAACCAGCCAATCGTTCCGTTGCTAATCAAAAGCTACTTGGTGTGATTTGGCCTGGAGATACAACCCAGAAGCCTCGTGGTTGGGTTTTTCCCAACAATGGAAGGCATTTAAGAATTGGAATACCAAGAAGGTATAGTTACCTTGAATTTGTCTCTCAAGTACCTGGCACAGACCAATTCAAGGGGTTCTGCATTGATGTATTTCTTGCTGCCGTGAATTTGTTGCCCTATGGTGTCCCTTATGAATTTATCCTATCTGGGGATGGTGGCAACATTCCTGGTGAGCTTGTCAGTCAGGTCACAGCCGGAGTCTTTGATGCTGTAGTAGGTGACATAACAATTACTACAGAGAGAACAAAGATGGTGGATTTTACTCAACCGTATCTCGAGTCTGGTCTTGTAATAGTAGCGCCCGTCATGAAGTTGGAATCCGGTGCTTGGTCGTTTCTGAGACCATTTACTCCAATGATGTGGGCTGTCACAGCAATCTTCTTCCTAGCAGTGGGAGCTGTTATTTGGGTTTTGGAACATAGGCAGAATGATGAATTTCGAGGACCTCCCAAAAGACAAGCAATTACAATTTTGTGGTTTAGTTTTTCAACTATGTTCTTTGCCCACAGGGAAAATACAGTGAGCACTCTTGGTCGTTTTGTGCTGATTATATGGTTATTTCTAGTTCTTATAATAAACTCAAGTTACACAGCAAGCCTGACTTCAATCCTCACAGTGCAAAAGCTTGCTTCCCCTATTGAAGGCATCGAAAGTTTAGTTAATAGCAAAGATCCAATTGGCTACCAGATAGGTTCTTTTTCTAGAAATTATTTAATTGAGGAAGTTGGTATTGATAAATCCAGACTAGTTCCCCTTAAAACACCAGAAGAGACTGCTAAAGCATTGAAAGATGGTCCCAGTAAGGGTGGTGTTGCTGCATATGTTGATGAGCGTGCATACATGGAGCTCTTTCTTTCAACTCGGTGTGATTTTACTATTGTAGGTCAGGAGTTCACGAGAAATGGATGGGGATTTGCCTTTCCAAGAGACTCGCCTTTAGCAGTGGACATGTCGACTGCCATTCTGCAATTGACTGAGAATGGAGATCTACAGAGAATCCGTGACAAATGGCTTTTGAGTAGGGCTTGCTTATCACAAAATGCAAAGTTTGAAGTGGACAGACTTAATCTTAAAAGCTTTTGGGGCCTCTATCTTGTCGCTGGGTTGGCTTGTGCTCTTGCTTTATTCACACATCTTATTATTATAATGAGGCAGTATAGAAAGCACCAGTCAGAGGAACTTGAGTCTCCAAGCCAACAAAGCCAAGGATCTTCGTCTGTTCGGACTTTCCTCGCATTTGCAGACAAAAAAGAAGAGGAAGTTAAGGGTCAGTCCAATAGAAGGCAAATGGAGAGGATCTCGTACAGAAGCAATGATGATGGATCAAGCTTAGGCGTCACTTCCAATAAAGGATATGTTCAATCATCAGCTTCAAACAGAAGCATTGATTATGCTGATACATAG 2901 0.4181 MPRVTFGHQKEKGVRVILSGFSLATSTMMGVWLVVFMVLFNGFSSTWADMNNSTVPDSVNIGVLYSFNTTIGKILKIAIEAAVEDVNSDPSVLGKTQLKILMQEDSKYRGFLSIAETLELMAKHTVAVIGPQSSITAHVISHVANELQIPLLSFSATDPTLSPLQFPFFIRTAMNDLFQMTAIAELVEFYGWREVIAIYVDDDYGRNGIASLGDKLAERRCKISFKAPMTAEATKEEITDVLVQVALAESRVIVLHINTALGAKVFSVAHNLEMMGTGYVWIATIFLSTLLDTASHLPSDEMHEIQGVITLRMYTPETELKRRFVARWKNSTRGNTAQGPLGLNTYCLYAYDTVWLLARAMDTFFRKGNRITFSNDSKLSELHGNSLHLEALNIFDEGNILRSSILGVNMTGVTGQVRYASDGNLVNPAYEVLNVVGTGTRRIGYWSNYSGLSVVTPESLYSKPANRSVANQKLLGVIWPGDTTQKPRGWVFPNNGRHLRIGIPRRYSYLEFVSQVPGTDQFKGFCIDVFLAAVNLLPYGVPYEFILSGDGGNIPGELVSQVTAGVFDAVVGDITITTERTKMVDFTQPYLESGLVIVAPVMKLESGAWSFLRPFTPMMWAVTAIFFLAVGAVIWVLEHRQNDEFRGPPKRQAITILWFSFSTMFFAHRENTVSTLGRFVLIIWLFLVLIINSSYTASLTSILTVQKLASPIEGIESLVNSKDPIGYQIGSFSRNYLIEEVGIDKSRLVPLKTPEETAKALKDGPSKGGVAAYVDERAYMELFLSTRCDFTIVGQEFTRNGWGFAFPRDSPLAVDMSTAILQLTENGDLQRIRDKWLLSRACLSQNAKFEVDRLNLKSFWGLYLVAGLACALALFTHLIIIMRQYRKHQSEELESPSQQSQGSSSVRTFLAFADKKEEEVKGQSNRRQMERISYRSNDDGSSLGVTSNKGYVQSSASNRSIDYADT 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00828 966 PRINTS Metabotropic glutamate GPCR signature 179 195 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00828 966 PRINTS Metabotropic glutamate GPCR signature 160 179 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00828 966 PRINTS Metabotropic glutamate GPCR signature 195 212 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00828 966 PRINTS Metabotropic glutamate GPCR signature 128 154 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00828 966 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 133 161 - -
Bach4g00828 966 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 72 88 - -
Bach4g00828 966 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 350 362 - -
Bach4g00828 966 Gene3D - 494 606 - -
Bach4g00828 966 MobiDBLite consensus disorder prediction 916 951 - -
Bach4g00828 966 SUPERFAMILY Periplasmic binding protein-like II 474 839 - -
Bach4g00828 966 Pfam Receptor family ligand binding region 77 437 IPR001828 -
Bach4g00828 966 CDD PBP1_GABAb_receptor_plant 60 455 IPR044440 -
Bach4g00828 966 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 59 899 IPR015683 -
Bach4g00828 966 Pfam Ligand-gated ion channel 838 870 IPR001320 GO:0015276|GO:0016020
Bach4g00828 966 PIRSF IGluLR_plant 26 963 IPR017103 -
Bach4g00828 966 Gene3D - 607 735 - -
Bach4g00828 966 FunFam Glutamate receptor 494 608 - -
Bach4g00828 966 SMART GluR_14 500 839 IPR001320 GO:0015276|GO:0016020
Bach4g00828 966 MobiDBLite consensus disorder prediction 916 934 - -
Bach4g00828 966 FunFam Glutamate receptor 734 841 - -
Bach4g00828 966 Gene3D - 783 844 - -
Bach4g00828 966 Pfam Bacterial extracellular solute-binding proteins, family 3 507 837 IPR001638 -
Bach4g00828 966 Gene3D - 175 452 - -
Bach4g00828 966 FunFam Glutamate receptor 175 333 - -
Bach4g00828 966 FunFam Glutamate receptor 608 738 - -
Bach4g00828 966 Gene3D - 77 427 - -
Bach4g00828 966 CDD GluR_Plant 499 837 - -
Bach4g00828 966 SUPERFAMILY Periplasmic binding protein-like I 54 491 IPR028082 -
Bach4g00828 966 MobiDBLite consensus disorder prediction 935 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00828 Bach-Chr4 5498862 5503093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00828 32 933 Ion Channels AT3G51480 60.486 0.0 1136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00828 K05387 - gmx:100788917 1341.25