Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00826 TGGAAATCCCACTACGTCCCTGACACACCCATCTCTTCTCAACCTATGGTTTCTCCCATGTTATTATCTGTTTCATACCTGGAGCTCAGATGTTCACAGTTGCTGTTGCATGGTGACAAACATCCTCAATTTGGTGATTATGCTTTTTTCCCACATGAGGCGGCTTTACAACCATAATGTTAGATGCCAAGGGTAACTTTAGTTCATCAAAAAGAAAAAGGAGTCAGGGTGATACTTAGTGGATTTTCTTTGGCAACTTCAACCATGATGGGAGTTTGGCTTGTGGTCTTCATGGTTCTCTTCAATGGGTTCTCTTTAACTTGGGCTGACATGAATAATTCCACAGTACCTGATTCTGTGAATATTGGGGTTCTCTACTCTTTCAATACTACTATTGGTAGGATTTTAAAAGTCGCTATAGAAGCTGCAGTTGAAGATGTAAATTCTGATCCATCAGTTCTTGGTAAAACTCAGCTGAAAATCTTAATGCAAGAGGATTCCAAGTACAGAGGTTTTCTGAGCATAGCTGAAACCTTGGAGCTCATGGCAAAGCACACTGTCGCTGTAATTGGCCCTCAATCCTCAATAACAGCTCATGTCATTTCTCATGTAGCAAATGAGCTCCAAATTCCGCTGCTATCATTCACCGCAACAGACCCAGCCCTTTCTCCACTCCAATTCCCATTCTTCATCAGAACTGCTATGAATGATCTTTTTCAGATGACAGCAATAGCAGAGCTTGTTGAATTCTATGGGTGGAGAGAAGTAACTGCAATCTATGTCGATGACGACTACGGGAGAAATGGAATCGCTTCGTTAGGGGATAAGCTTGCTGAGAGACGTTGTAAGACCTCATTTAAAGCACCAATGACCGCTGAAGCAACTAAGGAGGAGATTACTGATGTGCTCGTTCAGGTTGCTCTGGCAGAATCTCGGGTTATAGTTCTTCACACTGATACTGCGTTGGGGGCTAAGGTTTTCAGTGTGGCACATAATCTTGAGATGATGGGAATTGGGTATGTCTGGATAGCCACTACTTTCCTTACTACTCTGCTGGATACTGCCAGTCACCTCCCTTCAGATGAAAGGCACGAAATTCAAGGAGTTATTACACTACGCATGTACACACCAGAGACAGAACTGAAAAGGAGATTTGTTTCTAGGTGGAAAAACTTGACCAGAGGAAACACTGCTAAGGGCCCCTTGGGACTGACTACTTATTGTCTCTATGCATATGATACTGTTTGGTTACTTGCTCGTGCAATTGACACATTTTTCAGAAAAGGGAATCGAATTACTTTTTCAAATGATTCAAAGTTATCTGAACTACATGGAAACAGCTTACATCTTGAAGCTTTGAACATTTTCGATGAAGGGAATATTTTGCGTAGTAGTATTTTAGGTGTCAACATGACTGGTGTAACAGGTCAAGTCAGGTATGAATCTGATGGGAACCTTGTGAATCCAGCGTATGAAGTGCTCAATGTGATGGGGACAGGAACTCGAAGGATTGGTTATTGGTCTAATTACTCTGGTTTATCAGTTGTTACTCCAGAATCACTTTATTCAAAACCAGCCAATGGTTCTGTTGCTAATCAAAAGCTACTTGATGTGATTTGGCCTGGAGATACAACCCAGAGGCCTCGTGGTTGGGTTTTTCCCAACAATGGAAGGCATTTAAGAATTGGAATACCAAGAAGGGATAGTTACCTTGAATTTGCCTCTCAAGTACCTGGCACAGACCAATTCAAGGGGTTCTGCATTGATGTATTTCTTGCTGCAGTGAATTTGTTGCCCTATGGTGTCCCGTATGAATTTATCCTATCTGGGGATGGTGATAACATCCCTGGTGAGCTTGTCAGTCAGGTCACAGCCGGAGTCTTTGATGCTGTAGTAGGTGACATAACAATTACTACAGAGAGAACAAAGATGGTAGATTTTACTCAACCGTATGTCGAGTCTGGTCTTGTAATAGTTGCGCCCATCATGAAGTTGGAATCCAGTGCTTGGTCGTTTCTAAGACCATTTACTCCAATGATGTGGGCTGTCACAGCAATCTTCTTCCTAGTAGTGGGATCCGTTATTTGGATTTTGGAACATAGGCAGAATGATGAATTTCGAGGACCTCCCAAAAGACAAGCAATTACAATTTTGTGGTTTAGTTTTTCAACTATGTTCTTTGCCCACAGGGAAAATACTGTGAGCACTCTTGGTCGCATTGTGCTGATTATATGGTTATTTGTAGTTCTTATAATAAACTCAAGTTACACAGCAAGCCTGACTTCAATCCTCACAGTGCAAAAGCTTGCTTCCCCTATTGAAGGCATCGAAAGTTTGGTTAATAGCAAAGATCCAATTGGCTACCAGATAGGTTCTTTTACTAGAAATTATTTAATTGAGGAAGTTGGTATTGATAAATCCAGACTAGTTCCCCTAAAAACACCAGAAGAGACTGCTAAAGCATTGAAAGATGGTCCCAGTAAGGGTGGTGTTGCTGCATATGTTGATGAGCGTGCATACATGGAGCTCTTTCTTTCAACTCGGTGTGATTTTACTATTATAGGTCAGGAGTTCACGAGAAATGGATGGGGATTTGTCTTTCCAAGAGACTCGCCTTTAGCAGTGGACATGTCGACTGCCATTCTGGGATTGACTGAGAATGGAGATCTACAGAGGATCCGTGACAAATGGCTTTTGAGTAGGGCTTGCTTATCACAAAATGCAAAGTTTGAAGTGGACAGACTTAATCTTAAAAGCTTTTGGGGCCTCTATCTAGTCGCTGGGTTGGCTTGTGCTCTTGCTTTATTCATACATATTATTATTATAATGAGGCAGTATAGCAAGCACCAGTCAGAGGAACTTGAGTCTCCAAGCCAACAAAGCCAAGGATCTTCGTCTGTTCGGACTTTCCTCGCATTTGCAGACAAAAAAGAAGAGGAAGTTAAGAGTCAGTCCAAGAGAAGGCAAATGGAGAGGATCTCGTACAGAAGCAGTGATGGTGGATCAAGCTTAGGCGTCACTTCCAATAAAGGTAAAGATTTACCTCCGTGGAAAGAATGA 3060 0.4199 MPRVTLVHQKEKGVRVILSGFSLATSTMMGVWLVVFMVLFNGFSLTWADMNNSTVPDSVNIGVLYSFNTTIGRILKVAIEAAVEDVNSDPSVLGKTQLKILMQEDSKYRGFLSIAETLELMAKHTVAVIGPQSSITAHVISHVANELQIPLLSFTATDPALSPLQFPFFIRTAMNDLFQMTAIAELVEFYGWREVTAIYVDDDYGRNGIASLGDKLAERRCKTSFKAPMTAEATKEEITDVLVQVALAESRVIVLHTDTALGAKVFSVAHNLEMMGIGYVWIATTFLTTLLDTASHLPSDERHEIQGVITLRMYTPETELKRRFVSRWKNLTRGNTAKGPLGLTTYCLYAYDTVWLLARAIDTFFRKGNRITFSNDSKLSELHGNSLHLEALNIFDEGNILRSSILGVNMTGVTGQVRYESDGNLVNPAYEVLNVMGTGTRRIGYWSNYSGLSVVTPESLYSKPANGSVANQKLLDVIWPGDTTQRPRGWVFPNNGRHLRIGIPRRDSYLEFASQVPGTDQFKGFCIDVFLAAVNLLPYGVPYEFILSGDGDNIPGELVSQVTAGVFDAVVGDITITTERTKMVDFTQPYVESGLVIVAPIMKLESSAWSFLRPFTPMMWAVTAIFFLVVGSVIWILEHRQNDEFRGPPKRQAITILWFSFSTMFFAHRENTVSTLGRIVLIIWLFVVLIINSSYTASLTSILTVQKLASPIEGIESLVNSKDPIGYQIGSFTRNYLIEEVGIDKSRLVPLKTPEETAKALKDGPSKGGVAAYVDERAYMELFLSTRCDFTIIGQEFTRNGWGFVFPRDSPLAVDMSTAILGLTENGDLQRIRDKWLLSRACLSQNAKFEVDRLNLKSFWGLYLVAGLACALALFIHIIIIMRQYSKHQSEELESPSQQSQGSSSVRTFLAFADKKEEEVKSQSKRRQMERISYRSSDGGSSLGVTSNKGKDLPPWKE 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00826 958 SUPERFAMILY Periplasmic binding protein-like II 475 839 - -
Bach4g00826 958 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 59 899 IPR015683 -
Bach4g00826 958 CDD PBP1_GABAb_receptor_plant 60 455 IPR044440 -
Bach4g00826 958 Pfam Ligand-gated ion channel 838 870 IPR001320 GO:0015276|GO:0016020
Bach4g00826 958 SMART GluR_14 498 839 IPR001320 GO:0015276|GO:0016020
Bach4g00826 958 SUPERFAMILY Periplasmic binding protein-like I 54 491 IPR028082 -
Bach4g00826 958 PRINTS Metabotropic glutamate GPCR signature 128 154 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00826 958 PRINTS Metabotropic glutamate GPCR signature 160 179 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00826 958 PRINTS Metabotropic glutamate GPCR signature 195 212 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00826 958 PRINTS Metabotropic glutamate GPCR signature 179 195 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach4g00826 958 FunFam Glutamate receptor 608 738 - -
Bach4g00826 958 Pfam Receptor family ligand binding region 77 436 IPR001828 -
Bach4g00826 958 Gene3D - 757 806 - -
Bach4g00826 958 Pfam Bacterial extracellular solute-binding proteins, family 3 519 837 IPR001638 -
Bach4g00826 958 CDD GluR_Plant 499 837 - -
Bach4g00826 958 MobiDBLite consensus disorder prediction 934 948 - -
Bach4g00826 958 Gene3D - 608 735 - -
Bach4g00826 958 FunFam Glutamate receptor 734 841 - -
Bach4g00826 958 FunFam Glutamate receptor 175 332 - -
Bach4g00826 958 PIRSF IGluLR_plant 27 951 IPR017103 -
Bach4g00826 958 MobiDBLite consensus disorder prediction 915 958 - -
Bach4g00826 958 Gene3D - 807 837 - -
Bach4g00826 958 Gene3D - 77 427 - -
Bach4g00826 958 MobiDBLite consensus disorder prediction 915 933 - -
Bach4g00826 958 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 350 362 - -
Bach4g00826 958 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 133 161 - -
Bach4g00826 958 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 72 88 - -
Bach4g00826 958 Gene3D - 175 452 - -
Bach4g00826 958 Gene3D - 494 607 - -
Bach4g00826 958 FunFam Glutamate receptor 494 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00826 Bach-Chr4 5486179 5490787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00826 32 937 Ion Channels AT3G51480 59.780 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00826 K05387 - gmx:100788917 1337.4