Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00825 GCGGTTTTCTTTTCTTTTCTTCAGTGCCCAGGTTTTCCCTTATGGTCTTTCTCAGCTGCTGATTTGGTTCTATCTTCCACAGTAAATAACACTGGCTTGCTCAAGTTGATCTTCAGTACTCAAATTGAACCTAACTTCAGGTTTCTGTCCCATTTTGCTGCTATAGATTCTAGGGTAATAACTACTGGATTTTCTTTGGGTAACTCCAACTATGATTAAATTTTGGCTTGTGGTCTTGATGGTTCTGCTCAATGGACTCTATTCAACTGGGGCTGGAATCAATGATTCCACAGTACCTGATTCTGTAAATATTGGAATTATCTACGCTTTCAATACTAGTATCGGTAGAATTTTAAAAATAGCTTTGGAAGCTGCACTTGAAGATGTGAATTCTGATCCATCTATTCTTGGTAAAACTCAACTGAAAGTCTTAATGCAAGAGGATTCCAAGTACAGAGGTTTCCTGAGCATTGCTGAAACCTTGCAGCTGATGACAAAACGTACTATTGCTATAATTGGTCCCCAATCCTCCATTACGGCTCATGTCATATCTCATGTAGCAAATGAGCTCCAAGTTCCGCTGTTATCATTCTCAGCAACAGACCCAGCCCTTTCTCCACTTCAGTTTCCATTCTTCATCAGAACTGCTCAAAATGATCTTTTTCAGATGACAGCAATAGCAGAACTTGTTGAATTCTATGGGTGGAGAGAGGTAATTGCAATCTATGTCGATGACGACTACGGGAGAAATGGAATCGCTTCGTTAGGGGATAAGCTTGCTGAGAGACGTTGTAAGATCTCATTTAAAGCACCAATGACCGCTGAAGCAACTAATGAAGAGATTACTGATGTGCTTGTTCAGGTTGCTCTAGCAGAATCTCGAATCATAATTATTCACACTAGCACTATCTGGGGGCCTAAGGTTTTCAATGTGGCACAGAATATTGGAATGATGGGAACTGGGTATGTCTGGATAGCCACTACTTTCCTTTCTACTCTGCTGGATACTGCTAGTCCCCTCCCTTCAGATGAAATGCAGGACATTCAAGGTGTTGTTACACTACGCATGTACACACCAGAGACAGATCTGAAAAGGAGATTTGTTTCTAGGTGGAAAAACTTGACAAGAGGAAACACTGCTAATGGCCCCTTGGGACTGACTACTTATTGTCTCTATGCATATGATACTGTTTGGTTACTTGCTCGTGCAATTGACACATTTTTCAGAGAAGGGAATGGAATCACATTTTCAAATGATTCAAAGTTATCTGAACTACATGGAAACAACTTAGATCTTGATGCTTTGAACATTTTCAATGAAGGGAATTTTTTGCGTCGTAGTATTTTAGGTGTTAACATGACTGGTGTAACAGGTCAAGTGAAGTATACATATGATGGAAACCTAGTTAATCCAGCTTATGAAGTCCTCAATGTGATAGGGACAGGAGTTCGAAGGATTGGTTATTGGTCCAATTACTCTGGATTATCAATTGTTCCTCCAGGATCACTTTATTCAAAGCCAGCCAATCGTTCTGTTGCTAATCAAAAGCTACTTGATGTGATTTGGCCGGGAGATACAGCCCAGAAGCCTCGTGGTTGGGTTTTTCCCAACAATGGAAAGCATTTGAAAATTGGAATACCAAAAAGGGTAAGTTACCTTGAGTTTGTGTCTCAAGAACAAGGCAGAGACTCATTCAAGGGTTTCTGCATTGATGTATTTCTTGCTGCAGTGAACTTGTTGCCATATGGTGTCCCATATAATTTTGTCCCATTTGGAGATGGTGACAGCAATCCTAGTAACACTGAGCTGGTCCGTCTGATCACAGCGGGAGTCTTTGATGCTGCTGTAGGTGACATTACAATAACTACAGAGAGAACAAAGATGGTGGATTTTACTCAACCATTTATTGAGTCTGGTCTAGTAGTAGTGACACCCGTAAAGAAGTTGGAAACCAGTGCTTGGGCCTTTCTGAGGCCATTTACTCCAATGATGTGGGCTGTTACAGGTATCTTCTTCCTATTAGTTGGAGCTGTTGTTTGGATTTTGGAACATCGGCAGAATGATGATTTCCGGGGACCTCCCAAAAGGCAATTGGTTACAATTTTGTGGTTCAGTTTTTCAACCATGTTCTTTGCCCACAGGGAAAATACAGTGAGCACTCTTGGTCGCTTGGTGCTGCTGATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTACACAGCAAGCTTGACCTCAATCCTCACGGTGCAACAGCTTGTTTCCCCTATTGAAGGCATCGAAAGTTTAATTAGTAGCAAAGACCGAATTGGCTACCTGCAAGGTTCTTTTACCAGAGATTATTTGATTGAGGAAGTAGGTATTCATGAATCCAGACTTGTTCCCCTAAAGACACCAGAAGAGACTGCTAAAGCATTGAAAGATGGTTCTGGTAATGGTGGTGTTGCTGCATATATTGATGAGCGTGCATACATAGAGCTTTTCCTTTCAAGTGAGTGTGATTTTGCTATTGTAGGTCAAGAGTTCACGAGAAACGGTTGGGGATTGGCATTTCCAAGAGATTCCCCATTAGCGATTGACATGTCGACTGCAATTCTGGAATTGGCCGAGAATGGAGATCTGCAAAGGATCCATGACAAATGGCTTTTGAGCAGTGCTTGCCTATCTCAAGGTGCAAAGCTTGAAGTTGACAGACTTAATCTTAGAAGCTTTTGGGGTCTCTATCTAGTTGCTGGGTTGGCTTGTTTTCTTGCACTCTTCATATATCTTATACGAATAATGAGGCAGTACAAGAAGCACCACTCAGAAGAAGAAGAATTTTCTAGTCCAAGCCAACGAAGCTCAGGATCTTCATGCGTTCGGACATTCCTTTCATTTGCTGACGAAAAAGCAGAAGATGTTGAGAGCCGCTCCAAGAGAAGGCAAATGGAGAGGATCTCCTACAGGAGCAGCGATAGTGGATTAAACTCAGCCATGGACTCCAGTAAAGGATATTCTCAATCATCAGCTTCAAACAGAAGCCCAGATTGTGGTAATGAAGCATGACCAACTGTTGCCTATTCCTTCTACACAATTTTATATCCTCTTCTGGATGCCACTGATGCAACTACTGGCTTCCTTTCCTGCTATTTTCTTTTCTTTCTAATTAATACATGTATGTTTTGAATATCAATCTGTATCTGACAAAGATATCCCAAGGGGTTCTTTCAATTTTTT 3217 0.4113 MIKFWLVVLMVLLNGLYSTGAGINDSTVPDSVNIGIIYAFNTSIGRILKIALEAALEDVNSDPSILGKTQLKVLMQEDSKYRGFLSIAETLQLMTKRTIAIIGPQSSITAHVISHVANELQVPLLSFSATDPALSPLQFPFFIRTAQNDLFQMTAIAELVEFYGWREVIAIYVDDDYGRNGIASLGDKLAERRCKISFKAPMTAEATNEEITDVLVQVALAESRIIIIHTSTIWGPKVFNVAQNIGMMGTGYVWIATTFLSTLLDTASPLPSDEMQDIQGVVTLRMYTPETDLKRRFVSRWKNLTRGNTANGPLGLTTYCLYAYDTVWLLARAIDTFFREGNGITFSNDSKLSELHGNNLDLDALNIFNEGNFLRRSILGVNMTGVTGQVKYTYDGNLVNPAYEVLNVIGTGVRRIGYWSNYSGLSIVPPGSLYSKPANRSVANQKLLDVIWPGDTAQKPRGWVFPNNGKHLKIGIPKRVSYLEFVSQEQGRDSFKGFCIDVFLAAVNLLPYGVPYNFVPFGDGDSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPFIESGLVVVTPVKKLETSAWAFLRPFTPMMWAVTGIFFLLVGAVVWILEHRQNDDFRGPPKRQLVTILWFSFSTMFFAHRENTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLVSPIEGIESLISSKDRIGYLQGSFTRDYLIEEVGIHESRLVPLKTPEETAKALKDGSGNGGVAAYIDERAYIELFLSSECDFAIVGQEFTRNGWGLAFPRDSPLAIDMSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLNLRSFWGLYLVAGLACFLALFIYLIRIMRQYKKHHSEEEEFSSPSQRSSGSSCVRTFLSFADEKAEDVESRSKRRQMERISYRSSDSGLNSAMDSSKGYSQSSASNRSPDCGNEA 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00825 944 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 875 IPR015683 -
Bach4g00825 944 MobiDBLite consensus disorder prediction 892 944 - -
Bach4g00825 944 CDD GluR_Plant 470 812 - -
Bach4g00825 944 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Bach4g00825 944 PIRSF IGluLR_plant 1 942 IPR017103 -
Bach4g00825 944 MobiDBLite consensus disorder prediction 892 910 - -
Bach4g00825 944 Gene3D - 466 582 - -
Bach4g00825 944 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Bach4g00825 944 FunFam Glutamate receptor 709 816 - -
Bach4g00825 944 Gene3D - 148 425 - -
Bach4g00825 944 MobiDBLite consensus disorder prediction 911 944 - -
Bach4g00825 944 FunFam Glutamate receptor 148 305 - -
Bach4g00825 944 Gene3D - 50 400 - -
Bach4g00825 944 Gene3D - 583 710 - -
Bach4g00825 944 SMART GluR_14 471 814 IPR001320 GO:0015276|GO:0016020
Bach4g00825 944 Pfam Bacterial extracellular solute-binding proteins, family 3 492 812 IPR001638 -
Bach4g00825 944 FunFam Glutamate receptor 583 713 - -
Bach4g00825 944 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Bach4g00825 944 Gene3D - 779 811 - -
Bach4g00825 944 SUPERFAMILY Periplasmic binding protein-like I 28 464 IPR028082 -
Bach4g00825 944 FunFam Glutamate receptor 467 583 - -
Bach4g00825 944 SUPERFAMILY Periplasmic binding protein-like II 448 814 - -
Bach4g00825 944 Gene3D - 730 778 - -
Bach4g00825 944 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Bach4g00825 944 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 323 335 - -
Bach4g00825 944 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00825 Bach-Chr4 5480692 5485174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00825 5 914 Ion Channels AT3G51480 60.922 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00825 K05387 - gmx:100788917 1402.11