Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00824 ATGAGCAAAGTTTGGCTTCTCGCGTTTGTGATCTTCTACAGTGGTTTTCTTTCATATGGAGTCACCGGTGTTTCTACTAGACCCAGTAGCGTTAACATTGGAGCACTTTTTTCTTTCAATTCAACCGTTGGCAAGGTGGCAAAAGTTGCCATAGATGCTGCAGTCAAAGATATAAATTCCAACCCAAACATCCTCAGTGGAATTAAGCTTAATATTTCAATGCAGGATACAAAGTTGTCCAGTGGGTTCCTAGGAATCATTGATTCATTACTATTGATGGAGAAAGACACCGTGGCCATAATTGGTCCCCAGTACTCAGTTATGGCTCATGTTATTTCACATATAGCCAATGAGTTGCAAGTACCTTTACTATCATTTGCTGCCACAGAGCCTACCCTGTCTCCCCTTCAGTTCCCATACTTTGTTAGGACAACACAGAGTGATCTGTTTCAGATGGCTGCTATTGCTGATATTGTTAGCTACTATGAGTGGAGAGATGTAATAGCAGTCTTCATTGATGATGATCATGGAAGAAATGGGATAGCTGTATTAGGGGATAGGCTAGCTGAAAAACGTTGTAAAATCTCATATAAAGCAACCCTTAAACCTAATACCACAATAACCCGGGAAGAAATATACAATGTATTAGTGAAGGTAGCTTTAATGGAGTCTCGGGTTATAGTCCTCCACATATACCCTGCTTTTGGTCTAGATGTGCTTCGTGTGGCCAATGAACTTGGCATGGTAAATGGGTATGTGTGGATAACCACTGATTGGCTTCCTACTATACTAGATACAGAACCATCCCGTGCCGCTCCACACTTGAACGACATCCAAGGTGTTATCACCTTGCGCATGTACACCCCAGATAATTCCGATAAGAAGGATTTTGTTTCTAGGTGGAGTAATCTAACTAGAGAAACAGCTGCTGATCAGGGTACTTTTGGGTTGAACACCTATGGTCTATATGCCTATGACACTGTCAGGGTTCTTGCTTATGCACTTGATGCATTTTTCAACAGTGGGGGAACTTTGTCGTTTTCAAAGGATTCAAGTTTAAACATTTTAAGGGGGGATAACCTGCAATTGGATCCAATATGGGTCTTTTCTAATGGGAGTCTTCTGCTTAAGAACATTTTAGAGGTCAATGCAACAGGTGTAACAGGCCACTTGAAGTTTGGTTCTGATGGGAACCTTGCAGATCCTGCATATGAAGTCATTAATGTGATTGGCACTGGCATTAGAAGAATCGGTTATTGGTCCAATTCTTCTGGTTTATCAGTCAGTGAACCAGATAAAAGTAAACCCTCCATGACGCCAAAACTATATGGTGTCATCTGGCCAGGCCAAACAACTCAAACACCTCGAGGTTGGGTATTCGCCAGCGGTAATGGAAGGCATTTGAGAATCGGTGTCCCTCTGCGAATTAGTTACCGTGAATTTGTGTCAGAAGTTGAGGGCACTGACACGTTTGCTGGTTATTGTATAGATGTGTTTACTGCTGCACATGAGTTGTTCCCATATCCCGTCCCATATAAGTTCATTCCTTTTGGTGATGGCCGTACCAACCCATTAAACTCAGAACTTCTGCATATGATTACAACTGGTAAATTTGATGCTGTGGTGGGTGACATTACCATTACCACAAACAGAACAAAGATGGTGGACTTCACACAGCCATACATTGAGTCAGGACTAGTTGTTGTTGCCCCTATCAGGAAGTTGAATTCTAGTGCTTGGGCTTTCCTGAGACCATTTACTCCAATGATGTGGTTTGTGACAGGAATGTGTTTCTTAGTTGTGGGAGCTGTTATGTGGATATTAGAACGCAGGGTAAATGATGACTTTAGAGGCCCAGCTAGAAGGCAGTTTGTCACCATTATATGGTTTAGCTTTTCAACCTTGTTCTTCTCTCATAGAGAAAAAACTATGAGCACCCTTGGTCGCTTAGTGCTAATTATATGGCTGTTTGTGGTTCTGATACTCAACTCAAGCTATATTGCAAGTTTGACCTCTATTCTTACGGTGGAACAGCTTTCTTCCTCAGTGAAGGGAATTGAAAGCTTGGTTACCAGCAATGACCGCATTGGTTACCTGCGCGGTTCATTTGCCGAAAATTACCTAACTGAGGAGCTCAACATACACAAATCCAGGCTTGTTCCTCTGAACTGTCCTTCAGAGTATGAGAAAGCATTAAAGGATGGGCCTGGTAATGGTGGTGTTGCTGCAATAATAGATGAACGTGCATACATGGAGCTCTTCTTGGCAACTAGATGTGAATTTGGTATTGTGGGTCAAGAGTTCACCAAAATGGGATGGGGCTTTGCTTTCCCAAGGGACTCTCCCCTGGCTATTGACATGTCAACTGCCATACTAAAACTATCAGAGAATGGGGGTCTTCAGAGAATTCATGACAAATGGCTTACAAGAAGTGCTTGCAGTGCAGAAGGAGAGAAGCAAGGCGTAGACAGACTCGAGCTTAAGAGCTTCTGGGGTCTATTTCTTCTAAGTGGCATAGCATGCGTTGTTGCTCTCCTTTGTTATTTTATTCGGATGGCCTACCGTTTCAGCAGGCACCCCAATGGTAACCTTGAGTGCTCTTCACGCTCAGCTCGGCTTCGCTCATTTCTTTCCTTTGTCAATGAAAAAGAAGAGGAAGACAAGAACAGAGCAAAGAAAAGGAAAAAGGAAAGGGGTTGCAGTAGAAGAGTGGTGCATGAAGATGGGTCAAATGACAGTATCCATATCGACATTTGACAAATGAATTAGCCTATGGCTAACTCGCTCCACCTTCTTATAGGACCACTTACGATACATATAGCTTAATAAAATAAAATAATATTTCAATTATTGTAGGCACAAAATGTATTAATACCAAATGTATACAGCCGTATAATACCAATGCCAGTATAGTTG 2916 0.4218 MSKVWLLAFVIFYSGFLSYGVTGVSTRPSSVNIGALFSFNSTVGKVAKVAIDAAVKDINSNPNILSGIKLNISMQDTKLSSGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATEPTLSPLQFPYFVRTTQSDLFQMAAIADIVSYYEWRDVIAVFIDDDHGRNGIAVLGDRLAEKRCKISYKATLKPNTTITREEIYNVLVKVALMESRVIVLHIYPAFGLDVLRVANELGMVNGYVWITTDWLPTILDTEPSRAAPHLNDIQGVITLRMYTPDNSDKKDFVSRWSNLTRETAADQGTFGLNTYGLYAYDTVRVLAYALDAFFNSGGTLSFSKDSSLNILRGDNLQLDPIWVFSNGSLLLKNILEVNATGVTGHLKFGSDGNLADPAYEVINVIGTGIRRIGYWSNSSGLSVSEPDKSKPSMTPKLYGVIWPGQTTQTPRGWVFASGNGRHLRIGVPLRISYREFVSEVEGTDTFAGYCIDVFTAAHELFPYPVPYKFIPFGDGRTNPLNSELLHMITTGKFDAVVGDITITTNRTKMVDFTQPYIESGLVVVAPIRKLNSSAWAFLRPFTPMMWFVTGMCFLVVGAVMWILERRVNDDFRGPARRQFVTIIWFSFSTLFFSHREKTMSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSSVKGIESLVTSNDRIGYLRGSFAENYLTEELNIHKSRLVPLNCPSEYEKALKDGPGNGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGGLQRIHDKWLTRSACSAEGEKQGVDRLELKSFWGLFLLSGIACVVALLCYFIRMAYRFSRHPNGNLECSSRSARLRSFLSFVNEKEEEDKNRAKKRKKERGCSRRVVHEDGSNDSIHIDI 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00824 918 PIRSF IGluLR_plant 1 915 IPR017103 -
Bach4g00824 918 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
Bach4g00824 918 CDD PBP1_GABAb_receptor_plant 32 429 IPR044440 -
Bach4g00824 918 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 884 IPR015683 -
Bach4g00824 918 Pfam Ligand-gated ion channel 810 841 IPR001320 GO:0015276|GO:0016020
Bach4g00824 918 FunFam Glutamate receptor 705 812 - -
Bach4g00824 918 Pfam Receptor family ligand binding region 49 411 IPR001828 -
Bach4g00824 918 FunFam Glutamate receptor 579 709 - -
Bach4g00824 918 CDD GluR_Plant 468 808 - -
Bach4g00824 918 SUPERFAMILY Periplasmic binding protein-like II 444 810 - -
Bach4g00824 918 Gene3D - 49 401 - -
Bach4g00824 918 FunFam Glutamate receptor 147 307 - -
Bach4g00824 918 Pfam Bacterial extracellular solute-binding proteins, family 3 490 809 IPR001638 -
Bach4g00824 918 FunFam Glutamate receptor 463 579 - -
Bach4g00824 918 Gene3D - 464 578 - -
Bach4g00824 918 SUPERFAMILY Periplasmic binding protein-like I 27 458 IPR028082 -
Bach4g00824 918 Gene3D - 147 426 - -
Bach4g00824 918 Gene3D - 756 815 - -
Bach4g00824 918 Gene3D - 579 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00824 Bach-Chr4 5475334 5478749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00824 1 895 Ion Channels AT1G42540 59.279 0.0 1093
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00824 K05387 - gmx:100789442 1401.34