Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00820 ATGTCGTGCTCATCTTCATCAGGGTCTGAAGAAGATGATGAGGGCTATAGAAAAGGTGGCTACCACGCCGTCAGGGTCGGCGATCAGTTCGCCGGCGGCAGATACATAGCGCAGAGGAAATTGGGTTGGGGTCAGTTCTCCACCGTGTGGCTTGCGTATGATACTCAAACCTCTAGATATGTTGCTCTTAAGATACAGAAAAGCGCACCCCAGTTTGCTCAGGCTGCCCTTCACGAGATAGAAGTCCTTTTAGCCATTGCTGATCGTGACCCATCGAATTCAAAGTGTGTTGTCCAACTGATTGACAACTTTAAGCACACAGGTCCAAATGGGCAGCACCCGTGCATGGTCCTTGAATTTCTTGGGGATAGCTTGCTTCGGCTGATCAAGTATAAACGTTATAAAGGCCTTCCAATGAATAAAGTGAGGGATATATGTAAATGCATTTTGATTGGTCTGGATTACTTGCATAGAGAACTTGGTATAATGCACACTGACTTAAAACCTGAAAATATTCTTCTCGTTACCACCATTGATCCTGCCAAAGATCCTGTTAGATCTGAACTTGCCCCAATCTTAGAGAGGCCTGAGGGAAGTCTAAATGGTGGAGGAGTTACGAGTCTTATTGAGAAAAGGTTGAAAAGGAGGGCAAGGAGGGCAGTTGCTAAGATATCTGAAAGAAGAGTTTCTATGGGAGGAATAGGAGAACCTCCGAAGTCTGATAGAAATGTTGATGGGATTGATGTGAGATGTAAGCTAGTGGATTTCGGAAATGCATGTTGGGCTGATAAGCAGTTCGCAGAAGAAATCCAGACAAGGCAATATAGAGCTCCTGAAGTTATACTGCAGGCTGGGTATTCCTTCTCTGTTGACATGTGGTCTTTTGCATGCACTGCTTTTGAGCTTGCCACTGGTGATATGATGTTTACTCCTAAGACTGGACAAGGATTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGTAAGGTTGCTATAACTGGAGCACGATCCAAGGATTTCTTTGACAGGCACGGGGATCTGAAGAGGATTCGGAGGCTTAAATTCTGGCCGCTGGATAAATTGTTGATTGAGAGATACAAGTTTTCGGAGACTGATGCTCGTGAGTTTGCGGATTTTCTTTTACCGATTCTTGATTTTTCACCGGAGAAGCGACCAACAGCACAGCAGTGCCTGCAACACCCATGGCTCCAACCCAAGAATTCATCTCAGGATAAACAGATAAATGAACCCAACGTGGAGAAGGTTGACGTTGGAATGAGTAACCTTAAAATCAAGGTTGGAAAGTGA 1332 0.452 MSCSSSSGSEEDDEGYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTQTSRYVALKIQKSAPQFAQAALHEIEVLLAIADRDPSNSKCVVQLIDNFKHTGPNGQHPCMVLEFLGDSLLRLIKYKRYKGLPMNKVRDICKCILIGLDYLHRELGIMHTDLKPENILLVTTIDPAKDPVRSELAPILERPEGSLNGGGVTSLIEKRLKRRARRAVAKISERRVSMGGIGEPPKSDRNVDGIDVRCKLVDFGNACWADKQFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACTAFELATGDMMFTPKTGQGFSEDEDHLALMMELLGKMPRKVAITGARSKDFFDRHGDLKRIRRLKFWPLDKLLIERYKFSETDAREFADFLLPILDFSPEKRPTAQQCLQHPWLQPKNSSQDKQINEPNVEKVDVGMSNLKIKVGK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00820 443 CDD STKc_SRPK 24 411 - -
Bach4g00820 443 Gene3D Transferase(Phosphotransferase) domain 1 89 411 - -
Bach4g00820 443 SUPERFAMILY Protein kinase-like (PK-like) 29 418 IPR011009 -
Bach4g00820 443 ProSiteProfiles Protein kinase domain profile. 35 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00820 443 SMART serkin_6 35 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00820 443 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Bach4g00820 443 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 239 421 - -
Bach4g00820 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Bach4g00820 443 Gene3D Phosphorylase Kinase; domain 1 21 120 - -
Bach4g00820 443 Pfam Protein kinase domain 250 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00820 443 Pfam Protein kinase domain 36 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00820 443 FunFam Serine/threonine-protein kinase SRPK 113 411 - -
Bach4g00820 443 FunFam Protein kinase superfamily protein 21 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00820 Bach-Chr4 5450778 5454791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00820 3 413 EF-hand Containing Proteins AT5G22840 51.957 4.60e-168 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bach4g00820 Pkinase 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00820 K08832 - zju:107424333 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00820 4 5450778 5454791 Bach4g00820 4 5450778 5454791 ECH