Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00815 ATGTTTTCGTGGTTGATTCGCAAAAGCATTCACTGCCGAAGGCCCACACACGCACCACACCAACGAAGGCATAACATATCTGCAATATACGCTGTCTCTCACCTTCTTCGTGTGAAAACCCTACGTTCGAGGATCAACATGCCGAAAGCAAAAGCTGATGTGAAACCAACTGATAATAAGTTGAAGCGCAAGGGCGCTGGAGCAGGGAGGAAGCAGACAAAGAAAGCTGCCAAGGATCCAAACAAACCGAAGAGGCCTCCGAGTGCCTTCTTCGTTTTCATGTCGGAGTTCAGAGAGACATACCAAAAGGAGCATCCGAACAATAAATCCGTCTCTGTTGTTGGAAAAGCCGGTGGTGCAAAGTGGAAATCGCTGTCTGATGCTGAGAAAGCTCCATTCATAGCGAAGGCAGAGAAGAAGAAACAAGAGTATGGGAAGACCATGAAGGCGTACAATAACAAATTGGCTGGGGTTAAAAATCCGTCAGAGGAATACGAGTCTGACAAGTCCAAATCTGAAGTGCATGATGAAGAGGGCGATGATGAAAGTGGGGAGGAGGAAGAGGATGATGAGTGAAAGATGAAGCCCCAGGAAGCTGGTTAGGTGGAATATTATTTTGCATAGGTTCTCTTTGAATATGGATAACCTGAACTCTTAAAATCCATAGATGGTTTCGGATAAATAGTTTCTTTTGCTGCTCTTCCTAGATATTAGATTAGATCAAAATCTAGTAGGTTCGGTATCTTGATCTTGTACTTAAGCCATTCTCCC 771 0.4449 MFSWLIRKSIHCRRPTHAPHQRRHNISAIYAVSHLLRVKTLRSRINMPKAKADVKPTDNKLKRKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSEFRETYQKEHPNNKSVSVVGKAGGAKWKSLSDAEKAPFIAKAEKKKQEYGKTMKAYNNKLAGVKNPSEEYESDKSKSEVHDEEGDDESGEEEEDDE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00815 191 MobiDBLite consensus disorder prediction 48 88 - -
Bach4g00815 191 CDD HMG-box_AtHMGB1-like 84 144 - -
Bach4g00815 191 SMART hmgende2 82 153 IPR009071 -
Bach4g00815 191 MobiDBLite consensus disorder prediction 48 65 - -
Bach4g00815 191 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 83 152 IPR009071 -
Bach4g00815 191 Gene3D High mobility group box domain 67 175 IPR036910 -
Bach4g00815 191 Pfam HMG (high mobility group) box 83 152 IPR009071 -
Bach4g00815 191 Coils Coil 134 154 - -
Bach4g00815 191 MobiDBLite consensus disorder prediction 152 191 - -
Bach4g00815 191 MobiDBLite consensus disorder prediction 161 177 - -
Bach4g00815 191 SUPERFAMILY HMG-box 71 157 IPR036910 -
Bach4g00815 191 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 51 186 IPR031061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00815 Bach-Chr4 5401722 5403642 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bach4g00815 HMG_box 2.2e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00815 K25507 - gmx:100499992 192.586