Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00807 CTATACAATCTCAGTTTGTCTCTTTCATCGACTTTTGGACCGCTAATTGAATAGTTTGAGGCTTGAGAAGCCTCCCCGTGTTTGGTACGGGAGACCATGGGTGGAGACAGTGTCGTTGATGATGCAACCGAATCGAAGAGTGGTGATGGAGTAACAATCAACATTCGTTGCTCGAATGGGTCGAAATTCTCGGTTCAGATCACCCTCGAATCAACCGTTGGGTCGTTCAAGGAAGTTGTCGCTCGGAACTGCGACATCCCTGCCGATCAGCAGCGATTGATTTACAAGGGGCGGATCCTAAAGGACGATCAAACTCTGCAAAGCTACGGTTTGGAGGCAGATCACACCATCCATTTGGTCCGTGGTTTTACCCCAGTTGCATCGGGCAGTCCAACTGGTGGAACCACTACTGGTGGTACAAATACTACAACAAACAATACGAGAAGTGCTGGCTCTAATGAGAGTGGGGGTTCAGGAGGATCTGATTTTGGAGCTTCTTTGTTTCCTGGACTTGGCATTAATGGGTTAGGTGGCAATGGCATGAATGGCTTGTTTGGAGCTGGGCTTCAAGATCTTGATCAAATGCAGCAACCGCTTTTTCCAAACCCCAATCTAGTCAGAGAAATAATGAACTCACCCGCTATTCAGAATATAATAAATAATCCCGAGATAATGAGGAATTTTCTAATGAATAACCCACAGATGCGTGAGCTGATGGATCGAAATCCTGAGCTAGCACACATACTCAATGATCCCAGCACTCTCCGCCAGACACTTGAAGCTACAAGAAACCCTGAACTCATGCGTGAAATGATGCGAAATACAGACAGAGCAATGAGCAATATTGAATCTTCTCCTGAGGGATTTAACATGCTGAGGCGCATGTATGAAAATGTTCAAGAACCATTCTTAAATGCCACTACAATGGGTGGTAATACGGGAAATGAGAACTCTAACCCATTTGCTGCACTTCTGGGTACTCAAGGTGGCCAAACCAGAGACCAATCCACTAACCCATCTACTACTAGTTCAGATGCAACTGGTGGTTCTCCCTCCCCCAATACTAACCCACTCCCCAATCCGTGGAGCTCTACTGGTGCAGCAGGAGGTGCCCAAAATAACACAAGGTCAACTACAGGTGGGAATGCTAGGCAGCAGGCACCCACTGGCTTAGGAGGACTTGGTCTCCCAGATCTTGAAGGCATGTTGGGTGCTATGCCTGATACCACTGTACTGACCCAATTAATGCAAAATCCAGCTATTTCTCAAATGATGCAAAGTATGCTCTCAAATCCACAAGCCATGAATCAGATTCTTGGTGTCAATCCTGATCAGCGTGGCATGCCTGATTTAAATTCTCATGTCCGAGAAATGATGCAAAACCCAGAGTTACTTCGCCTGTTTTCTTCACCTGAGACAATGCAGCAACTTTTGTCTTTTCAGCAAACTCTTCTGTCACAGCTTGGTCGGCAACAATCAACACAGGGGTCAGCTCAAACTGGCGGAGGAACTGGATCAATGAACAACATGGGGTTGGAAATGTTGATGAACATGTTTGGTGGGCTTGGAGCTGGCAGCCTAGCCGTTCCTAACAGATCAGATGAGCCACCGGAGCAACTGTATGCCACCCAGCTGTCGCAGCTTCAAGAGATGGGTTTCTTTGACACGCAAGAGAATATACGGGCTCTTATTGCTACCTCAGGGAATGTTCATGCCGCGGTTGAACGGCTTTTAGGAAACCCTGGTCAGTAGCAGATAACGGCGGACCTGTTTCTTGTCGAAGGTCCATCATGTGGACTGCCTTTGGACTCAGTTGTATTCAGGCGCCTTGTTGGGTATAAATAAATCAGAAATATTTCCAAATTATAATGGTCAGATGTTGGTTTAGGTTTATAACTTTATATTTGGACTGAGATCGATCTCTCTTTCTCCCCCTTCCGAGTTCTGAAGGTCTTATTTTCTTCTTCATGTACATACTTTATATTTAAGACCTGTCACTTGAATTGCTTGTCAAATTTGATTATAGAAGAGGTTATCTCTTTAATTTTCCATCG 2054 0.4552 MGGDSVVDDATESKSGDGVTINIRCSNGSKFSVQITLESTVGSFKEVVARNCDIPADQQRLIYKGRILKDDQTLQSYGLEADHTIHLVRGFTPVASGSPTGGTTTGGTNTTTNNTRSAGSNESGGSGGSDFGASLFPGLGINGLGGNGMNGLFGAGLQDLDQMQQPLFPNPNLVREIMNSPAIQNIINNPEIMRNFLMNNPQMRELMDRNPELAHILNDPSTLRQTLEATRNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMGGNTGNENSNPFAALLGTQGGQTRDQSTNPSTTSSDATGGSPSPNTNPLPNPWSSTGAAGGAQNNTRSTTGGNARQQAPTGLGGLGLPDLEGMLGAMPDTTVLTQLMQNPAISQMMQSMLSNPQAMNQILGVNPDQRGMPDLNSHVREMMQNPELLRLFSSPETMQQLLSFQQTLLSQLGRQQSTQGSAQTGGGTGSMNNMGLEMLMNMFGGLGAGSLAVPNRSDEPPEQLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNPGQ 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00807 551 Pfam Ubiquitin family 21 88 IPR000626 GO:0005515
Bach4g00807 551 SMART CBM 200 239 IPR006636 -
Bach4g00807 551 SMART CBM 364 406 IPR006636 -
Bach4g00807 551 SMART CBM 410 445 IPR006636 -
Bach4g00807 551 SMART CBM 146 187 IPR006636 -
Bach4g00807 551 MobiDBLite consensus disorder prediction 457 477 - -
Bach4g00807 551 FunFam Ubiquitin domain-containing protein DSK2b 16 103 - -
Bach4g00807 551 SUPERFAMILY Ubiquitin-like 11 104 IPR029071 -
Bach4g00807 551 Gene3D - 7 98 - -
Bach4g00807 551 MobiDBLite consensus disorder prediction 96 128 - -
Bach4g00807 551 CDD UBA_PLICs 509 547 - -
Bach4g00807 551 CDD Ubl_Dsk2p_like 19 91 - -
Bach4g00807 551 Gene3D - 195 253 - -
Bach4g00807 551 MobiDBLite consensus disorder prediction 92 129 - -
Bach4g00807 551 MobiDBLite consensus disorder prediction 273 363 - -
Bach4g00807 551 FunFam Ubiquitin domain-containing protein DSK2b 197 253 - -
Bach4g00807 551 ProSiteProfiles Ubiquitin domain profile. 19 88 IPR000626 GO:0005515
Bach4g00807 551 Gene3D - 491 551 - -
Bach4g00807 551 SMART ubq_7 19 90 IPR000626 GO:0005515
Bach4g00807 551 SMART uba_6 509 547 IPR015940 -
Bach4g00807 551 MobiDBLite consensus disorder prediction 273 354 - -
Bach4g00807 551 Pfam UBA/TS-N domain 509 545 IPR015940 -
Bach4g00807 551 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 503 548 IPR015940 -
Bach4g00807 551 PANTHER UBIQUILIN 14 546 IPR015496 -
Bach4g00807 551 SUPERFAMILY UBA-like 505 547 IPR009060 GO:0005515
Bach4g00807 551 FunFam Ubiquitin domain-containing protein DSK2b 492 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00807 Bach-Chr4 5353458 5358156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00807 19 88 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 31.429 1.11e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00807 K04523 - qsa:O6P43_024949 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00807 4 5353458 5358156 Bach10g00696 10 4907432 4911433 BWGD
Bach4g00807 4 5353458 5358156 Bach4g00807 4 5353458 5358156 ECH