LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00806	ATGGTTATTTCTGATGAGAACAATTTGAACTCCATCAAACCCATGAATTTCGAAGGAGGTTTAGAAATGGATAACAGAAAGTTTGGGCAGGAGATTGGGCACAACAGGAGAGCGTTAGGCGCGATTAATCAGAACTTGGTTGAAGGTCGACCAAAGCACGAAATTTATGAAAAGAAGCAGGCGGATCCAGGGCATAGACCGATCACGAGGAGGTTTGCTGCACAGATTGCTAGCATGCAGCAATGTCAAGCCGAGGAAATCAAGAAGTCAAACCCATCAATTTTAAATTCGAATGACTTTGGAGTGTGTATATTCATTGATGCTGAACACAAGTTACCAGCAGACCAGCCAGTGCCCATGTCTCTAGAGAAATCAGAAGCAATGAATAGTGAACCCGTTCAGATGGAGGAAATTGAGATGGAGGATATAGTTGAAGAACCTATTGTGGACATTGACAGCTGTGATGCAAATAACCCTCTTGCAGTTGTTGATTATGTTGAAGATCTTTATGCCTACTACAGAAAAATGGAGAGTATTAGCTGTGTCTCACCAACTTACATGGATCAACAATTTGATGTTAATGAAAGGATGAGGGCTATACTGATAGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCACGAGACTTTGTTCCTTACTGTTAATCTGATAGATAGATTTTTGGAGAAGCAGAAAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGCTTGGTTGCCATGCTTTTAGCATGTAAATATGAAGAAGTTTCTGTACCTGTTGTTGGAGATCTAATCCTTATATCAGACAAAGCATACACAAGGAAGGAAGTTCTGGAAATGGAGAAGTTGATTCTTAATACACTGCAATTTAACATGTCGGTGCCAACAGCATATGTTTTTATGCGAAGGTTCGTAAAGGCAGCTCAAGCAGACAAAAAGCTTGAGCTGCTGGCTTTCTTTTTGATAGAACTCTCTCTTGTGGAATATGAGATGCTCAAGTTCCCACCATCTTTGCTAGCTGCAGCTGCTGTTTATACGGCTTACTGTACCATCTATGGTTTCAGACAGTGGAATAAGACTTGTGAATGGCATACAAACTACTCGGAAGATCAGCTATTTGAATGCTCAAGTTTGATGGTTGATTTCCACCAGAAGGCTGGGACAGGGAAGCTTACGGGAGTATATAGGAAGTACTGCACCTCCAAATTTTGCCATACAGCAAAATGTGAAGCAGCACGTTTTCTTCTGGAGAACCAACGGTAG	1266	0.4147	MVISDENNLNSIKPMNFEGGLEMDNRKFGQEIGHNRRALGAINQNLVEGRPKHEIYEKKQADPGHRPITRRFAAQIASMQQCQAEEIKKSNPSILNSNDFGVCIFIDAEHKLPADQPVPMSLEKSEAMNSEPVQMEEIEMEDIVEEPIVDIDSCDANNPLAVVDYVEDLYAYYRKMESISCVSPTYMDQQFDVNERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQKVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLILNTLQFNMSVPTAYVFMRRFVKAAQADKKLELLAFFLIELSLVEYEMLKFPPSLLAAAAVYTAYCTIYGFRQWNKTCEWHTNYSEDQLFECSSLMVDFHQKAGTGKLTGVYRKYCTSKFCHTAKCEAARFLLENQR	421

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00806	421	SMART	Cyclin_C_2	296	413	IPR004367	-
	Bach4g00806	421	SUPERFAMILY	Cyclin-like	295	412	IPR036915	-
	Bach4g00806	421	CDD	CYCLIN_AtCycB-like_rpt1	145	291	-	-
	Bach4g00806	421	FunFam	G2/mitotic-specific cyclin-1	290	408	-	-
	Bach4g00806	421	Gene3D	-	168	409	-	-
	Bach4g00806	421	CDD	CYCLIN_AtCycB-like_rpt2	296	411	-	-
	Bach4g00806	421	ProSitePatterns	Cyclins signature.	198	229	IPR006671	-
	Bach4g00806	421	PIRSF	Cyclin_A_B_D_E	4	142	IPR046965	GO:0016538\|GO:0044772
	Bach4g00806	421	PIRSF	Cyclin_A_B_D_E	105	421	IPR046965	GO:0016538\|GO:0044772
	Bach4g00806	421	Pfam	Cyclin, N-terminal domain	168	294	IPR006671	-
	Bach4g00806	421	Gene3D	-	182	294	-	-
	Bach4g00806	421	SMART	cyclin_7	203	287	IPR013763	-
	Bach4g00806	421	SMART	cyclin_7	300	382	IPR013763	-
	Bach4g00806	421	Pfam	Cyclin, C-terminal domain	296	411	IPR004367	-
	Bach4g00806	421	SUPERFAMILY	Cyclin-like	157	293	IPR036915	-
	Bach4g00806	421	FunFam	G2/mitotic-specific cyclin	182	289	-	-
	Bach4g00806	421	PANTHER	CYCLINS	126	392	IPR039361	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00806	Bach-Chr4	5345757	5348297	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach4g00806	1	417	Core Cell Cycle Gene Families	AT1G20610	57.110	1.32e-171	485

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00806	K21777		-	gmx:100798068	632.869