Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00784 ATGGCGGATTCTCCCCTCAGAAGGAGTTCAAGGTCCCCTTCCCCTTGGAGAGCTCAGTCAAGATCGAGATCAAGGTCAAGGTCTTGGTCTAGGCCAAAGTCTAGATCCAGGTCAAGATCCTGGTCAAGACAGAGACCTGGGTCCCATTCAAAGAGTAGGGGCAGATCAAGGTCCAGAAGTCATGGAAGACCTGATGCTGGAAATCCTGGAAATGCTCTTTATGTGACTGGCCTATCTTCAAGGGTTACTGATAGCGACCTAGTGGAGCACTTCTCTAAGGAGGGAAAGGTTGCTTCATGCTTTCTCGTGGTGGAGCCTCGTACCAATATATCTCGTGGGTTTGCCTTTGTTACGATGGATACTGTTGAGGATGCCAACCGCTGCATCAAATATCTCAATCAATCAGTTTTACAAGGCCGTTATATCACTGTTGAGCGGAATACATTGCCTCAGCCATGTTGGCAGCAACCAAAGAGTTCCATCCATGACAACTGTAGTGAAACAGCTTGATCATGGCAAGCTTAAACAGCTAATCAAATGCGTCTGATCCACTAAACATAGCAACTATATTGCCCAACAACTTTACAACCTCAGCATTCACTTTCAACTCTCAACTAATCAACGGACATTATCAACAACTTTCTAATCAGGCTTTTATGGTATCTCACACCTCGCATTAATCATGTGTGTGTGGACTTTTTTCCCCCTTTTCTTTTAAGCTAGGCTTCTTTCCTTGTTTTCCCCCGTTCTCTCCACTCTTAAACTCACTTTTAAACTTCGAAAAGGTTTTTGTAATCTTAAGTGTTACTCGGGCAGAAGTTATCAACGTAAAAGATTGTCACAAGGCTGAAGCATTTGTGCTATTAGTGGTACCTGGATGATTTATGTGAATTATCATTTTACCATGGAAACCCTAAGGATTGAGCTAATGTGTTTTATTTCAGTCTCGAAGAAAAAGGGCAAGAACTCCGACACCAGGGCATTATCTTGGGTTGAAGAGTACTAGAGACTACGGTCATCGGGGTGACCGTGGAAGGTATCGTGGTGGGTCTGGTCGTGATGACTATCAGTATCGTAGGTCTCCAAGGCGCTCACCATATCGAGGTGGCAGGGATTATTCACCCCGGCACTCACCTTATGGAGGAAGATCAAGGAGGGACAGGTCTAGGTCACTTCCTTATTCTCCGTATGGTAGCCCAGACAGGAAATATGCTCGCGGATCTAGATGATGCTTTCTGTTAGCATACTCTTATCTTTGAGGAGGGAAAGCAAAAAATGAACTATTCTGGTGCTGTGTCTTCTTGTTTGCAGTTACTATTATGTATGCAGATGTGTTTTTATAAGTGTGCAGTTAATTGTGAGACTTGATGTGTGCTGATTCTGAACTATTGATCTCGCAGCTTGCATATATGGCTATCGAAAGATTTCCA 1430 0.4392 MADSPLRRSSRSPSPWRAQSRSRSRSRSWSRPKSRSRSRSWSRQRPGSHSKSRGRSRSRSHGRPDAGNPGNALYVTGLSSRVTDSDLVEHFSKEGKVASCFLVVEPRTNISRGFAFVTMDTVEDANRCIKYLNQSVLQGRYITVERSRRKRARTPTPGHYLGLKSTRDYGHRGDRGRYRGGSGRDDYQYRRSPRRSPYRGGRDYSPRHSPYGGRSRRDRSRSLPYSPYGSPDRKYARGSR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00784 240 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 142 IPR000504 GO:0003723
Bach4g00784 240 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 149 IPR000504 GO:0003723
Bach4g00784 240 SUPERFAMILY RNA-binding domain, RBD 65 181 IPR035979 GO:0003676
Bach4g00784 240 MobiDBLite consensus disorder prediction 147 240 - -
Bach4g00784 240 Gene3D - 10 155 IPR012677 -
Bach4g00784 240 MobiDBLite consensus disorder prediction 24 58 - -
Bach4g00784 240 CDD RRM_SF 73 145 - -
Bach4g00784 240 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 3 155 - -
Bach4g00784 240 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 69 222 - -
Bach4g00784 240 MobiDBLite consensus disorder prediction 1 23 - -
Bach4g00784 240 MobiDBLite consensus disorder prediction 165 202 - -
Bach4g00784 240 SMART rrm1_1 72 145 IPR000504 GO:0003723
Bach4g00784 240 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00784 Bach-Chr4 5209712 5212477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00784 70 153 Eukaryotic Initiation Factors Gene Family AT1G49760 36.905 2.81e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00784 K12897 - cit:102618370 275.404