Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00745 ATGGCGGAGGAGAGGTTGACCGGTGAGGTTCTCTGGTTTCGCGATTCCAAGGGTTTTGGCTTCATCAAGCCTGACGATGGAGGAGAAGATCTGTTTGTTCATCAATCCTCCATCAAATCCGATGGCTATCGCACACTCGTAGTAGGCGATCGCGTTGAGTTTTTGGTTGCTTTCGGTGAAGACGGAAAATCCAAAGCCGTTGATGTTACTGGCCTCGATGGAGCTCCTCTCCAGTCTAAGAAAGATACTTACGGTGGCGGAGGTGGTCGTGGCGGGGGCGGATATGGCTTCAGCGGTGGATGGAGAAGCGGGGATAGGCGCAACGGTGGCGGCGGAGGCGGCGGCGGCTGTTATCACTGCGGTGATTTTGGGCACATAGCCAGGGATTGCAATGCTGGTAGCGGTGGTGCTTGTTATAATTGTGGTCAGTTTGGACACTTAGCGAGGGATTGCTCTCGCGCAAACAATAGCGGCGGTGGCAATGGTGCTTGCTATTCCTGTGGTGAGGTTGGGCACATGGCGAGAGACTGCACCAACGGAACCGGTGGTGGTGGTGGCGGTGATGGACGTTGCTTTAAATGTGGGGAAGTTGGCCACATGGCGAGGGATTGCAGTAAGGAAAGCAGTGGAAGGTATGGCGGTGGCGGTGGCGGTGGCGCAGGCAGACAAAACACTTGCTTTAATTGTGGGAAAGCTGGGCATTTTGCGAAAGAGTGCACTGAGCCATCCGATTGA 735 0.5483 MAEERLTGEVLWFRDSKGFGFIKPDDGGEDLFVHQSSIKSDGYRTLVVGDRVEFLVAFGEDGKSKAVDVTGLDGAPLQSKKDTYGGGGGRGGGGYGFSGGWRSGDRRNGGGGGGGGCYHCGDFGHIARDCNAGSGGACYNCGQFGHLARDCSRANNSGGGNGACYSCGEVGHMARDCTNGTGGGGGGDGRCFKCGEVGHMARDCSKESSGRYGGGGGGGAGRQNTCFNCGKAGHFAKECTEPSD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00745 244 Gene3D - 218 244 - -
Bach4g00745 244 Gene3D - 185 212 - -
Bach4g00745 244 Gene3D - 157 184 - -
Bach4g00745 244 ProSitePatterns Cold-shock (CSD) domain signature. 19 38 IPR019844 -
Bach4g00745 244 Gene3D - 110 156 - -
Bach4g00745 244 Pfam 'Cold-shock' DNA-binding domain 7 71 IPR002059 GO:0003676
Bach4g00745 244 ProSiteProfiles Zinc finger CCHC-type profile. 190 206 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 ProSiteProfiles Zinc finger CCHC-type profile. 138 151 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 SMART csp_8 7 72 IPR011129 GO:0003676
Bach4g00745 244 Gene3D - 6 84 IPR012340 -
Bach4g00745 244 ProSiteProfiles Zinc finger CCHC-type profile. 164 179 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 SUPERFAMILY Retrovirus zinc finger-like domains 208 242 IPR036875 GO:0003676|GO:0008270
Bach4g00745 244 Pfam Zinc knuckle 116 130 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 Pfam Zinc knuckle 163 179 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 Pfam Zinc knuckle 224 241 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 Pfam Zinc knuckle 190 206 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 Pfam Zinc knuckle 137 152 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 CDD CSP_CDS 7 71 IPR002059 GO:0003676
Bach4g00745 244 ProSiteProfiles Zinc finger CCHC-type profile. 117 130 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 ProSiteProfiles Zinc finger CCHC-type profile. 226 241 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 ProSiteProfiles Cold-shock (CSD) domain profile. 5 71 IPR002059 GO:0003676
Bach4g00745 244 PANTHER COLD SHOCK DOMAIN PROTEIN 2 180 241 - -
Bach4g00745 244 SUPERFAMILY Retrovirus zinc finger-like domains 157 207 IPR036875 GO:0003676|GO:0008270
Bach4g00745 244 SMART c2hcfinal6 137 153 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 SMART c2hcfinal6 225 241 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 SMART c2hcfinal6 116 132 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 SMART c2hcfinal6 190 206 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 SMART c2hcfinal6 163 179 IPR001878 GO:0003676|GO:0008270
Bach4g00745 244 SUPERFAMILY Retrovirus zinc finger-like domains 109 154 IPR036875 GO:0003676|GO:0008270
Bach4g00745 244 PRINTS Cold shock protein signature 44 62 IPR002059 GO:0003676
Bach4g00745 244 PRINTS Cold shock protein signature 8 23 IPR002059 GO:0003676
Bach4g00745 244 PRINTS Cold shock protein signature 29 38 IPR002059 GO:0003676
Bach4g00745 244 SUPERFAMILY Nucleic acid-binding proteins 3 72 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00745 Bach-Chr4 4973350 4974084 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CSD Bach4g00745 CSD 2.8e-22 CL0021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00745 K09250 - gmx:100806783 281.567