Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00724 ATGGGAAGAGTTATCCGAGCACAGCGTAAGGGTGCTGGTTCTGTCTTCAAGTCCCACACCCGTACTCGCAAGGGTGCTGCTAGATTCCGCAGCCTCGATTTCGGTGAGAGAAATGGGTATCTTAAGGGAGTAGTCACCGATGTCATTCACGACCCTGGTCGCGGTGCTCCACTGGCCAAGGTCGCCTTCCGCCATCCCTTCAGGTATAAGAAGCAATGCGAGTTGTTCATTGCTGCTGAGGGTATCTACACTGGTCAATTCATCTACTGCGGCAAGAAGGCCAACCTTGTCGTCGGTAATGTTTTGCCCCTCAGATCCATCCCTGAGGGAGCTGTTATCTGCAACGTTGAACACCATGTGGGTGACCGTGGTGTATTTGCTAGGTGTTCTGGCGATTACGCTATTGTTATCAGCCACAACCCAGATAACGACACCACTAGGATCAAGCTTCCTTCTGGTGCAAAGAAGATCGTTCCAAGTGGGTGTAGGGCCATGATTGGGCAAGTTGCAGGTGGAGGGAGGACTGAAAAGCCCCTCCTCAAAGCTGGAAATGCTTACCACAAATTTAAGGTAAAAAGGAATTGCTGGCCTAAGGTTCGTGGTGTGGCTATGAACCCAGTTGAGCATCCTCACGGAGGAGGTAACCACCAACACATCGGTCATGCCAGTACTGTCAGGCGTGATGCTCCTCCTGGCCAGAAAGTTGGTCTCATTGCTGCTAAGAGGACTGGTCGTCTTAGGGGGCAAGCTGCTGCAACTGCTTCTAAAGCTGATAAGAGTGCTTAGAGAGTTTAGAATTTTATTTGATTTGCATGTTCTTTCAATATTACTTACATTATAGTTTTTGTGCCAACTTTTTGGATACCATTTTGAGACGACATGGAGCTTTGAA 892 0.4888 MGRVIRAQRKGAGSVFKSHTRTRKGAARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVAFRHPFRYKKQCELFIAAEGIYTGQFIYCGKKANLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARCSGDYAIVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAKRTGRLRGQAAATASKADKSA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00724 261 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 1 255 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach4g00724 261 SUPERFAMILY Nucleic acid-binding proteins 1 97 IPR012340 -
Bach4g00724 261 SMART Ribosomal_L2_C_2 96 231 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bach4g00724 261 Gene3D Ribosomal protein L2, domain 3 170 247 IPR014726 -
Bach4g00724 261 Pfam Ribosomal Proteins L2, C-terminal domain 98 225 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bach4g00724 261 FunFam 60S ribosomal protein L8 90 169 - -
Bach4g00724 261 FunFam 60S ribosomal protein L2 170 247 - -
Bach4g00724 261 SUPERFAMILY Translation proteins SH3-like domain 99 246 IPR008991 -
Bach4g00724 261 ProSitePatterns Ribosomal protein L2 signature. 197 208 IPR022671 GO:0003735|GO:0005840|GO:0006412
Bach4g00724 261 Gene3D - 90 169 IPR014722 -
Bach4g00724 261 Gene3D - 1 86 IPR012340 -
Bach4g00724 261 MobiDBLite consensus disorder prediction 210 230 - -
Bach4g00724 261 PANTHER RIBOSOMAL PROTEIN L2 2 256 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach4g00724 261 SMART Ribosomal_L2_2 11 90 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach4g00724 261 FunFam 60S ribosomal protein L2 1 86 - -
Bach4g00724 261 Pfam Ribosomal Proteins L2, RNA binding domain 13 90 IPR022666 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00724 Bach-Chr4 4796941 4798249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00724 1 258 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 91.085 1.03e-178 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00724 K02938 - mnt:21409345 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00724 4 4796941 4798249 Bach10g00604 10 4301297 4302638 BWGD
Bach4g00724 4 4796941 4798249 Bach4g00724 4 4796941 4798249 ECH