Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00719 GTAAGTTTGATCATCGTCCTAACGCTGGCGAATACAAGGTTTCAGAAAGATCCAGAATTTGAGACCATTGGCTTCTGTTGGCATACTTTATCCGTTTCAGTTGCGGCAGCTCATCATGAGAACTCGAAACGCCGATTCCTCCAAATCAGCCACCGTTAAGAAGACACCGCCCGCAAGGAAATCCGCTACTAAAACGCCCACGACCCCTTCTAATTCGGCTGGAGAATCCGCTACTCCGAAATCCTCCGGGACAAAGCGCACGGCCTCGACCAAAACGAGACAGGCGAAGAAGAACGAGGCCTCGCTCAAACCAAACACAACATCCGATTCAAAACCAGAGCTATCATCAGATATTGTGGCGAAGGAGGCAAAAACCTCACCTGATGCTTCTTCAGTGGCACCAGGTACAAAAGTTGCTACAACTACAAAATCAGCAGTGAAGAGAACACCCGGGAGAACTAGAACTCCAACTAAAGCAGTTTCCACCCCTAAGCCAGCAGAACAAGTGGAGATAGGAGCTGATGAAACTCCAAAAGCAGATAATTTTGAGGCAGAAGAGAAATCTGAAGAGCCTCGAAATGTTGAAGTAGCCCATTCGGATGTCCTTGAGAGTGAAAAAGAGGGGGAACAAGACAATGAGGTTATTGAACAACTTGCAGAGAAAGAACAAAAGCCCATTGAAGTGGATGAACCTGTATTGGAAAATGTTTGTGAATCAGTAGAAAAGGAAAAAAGCATAGTGGAAATTGAAGTATCTACTTCTCATGATTCATCCTATTCTTTGAAGCTAGAAAAACCAACCTTTTTGGAGCTTACTAAACCTGCGGAAGATGAAGATTCTGCTGGTGCCAAGGTAGCAGAAAAGGCTGAGGAAGGGGAGGGAGAAAAGGCAAAAGAAGAATCAAAGGAAGAGGAGACAAATAATATTGGAGATAAAGAGGCATGTAACACTGAGTTTATTATCATTGAAGAGAAAGATCAGTTGAAGAAAGGAGAAGGTAAACCTGAAAAGGTTAATATTGGTGATGATGAAGAAATGCAGGGGTGTGATGAGAAGTTGGATCTTGGAGAACAGGGTGACGAGGATCTTATTGAGGATTATTCCGAGGAGCCTCTTGAAGAAACTGAAACATTGGAAGAGGAGCGCTGGGAATTGACTGCTATAGCAAAGGAGCGCAAGATTAAGAAAGAACATGAAATATTTGTTGGAGGCCTAGATCGTGATGCCACAGAGGAAGACCTGAAAAAGGTTTTCGAGAGGATTGGGGAGGTAGTTGAAGTCAGGTTGCACAAAAATGCTTCAACCAACAAAAACAAGGGCTATGCTTTTGTAAAGTTCGCTGATAAGGAACATGCAAAAAAAGCTTTGTCAGAGATGAAAAACCCTGTTATACATGGTAAGCGATGTGGCACAGCACCGAGTGAAGACAACGATACATTATTCTTGGGAAATATTTGTAATACGTGGACAAAAGAGGCTATTAAACAGAAGTTGAAGGATTACGGTGTTGAAGGTGTTGAAAAAATAACCCTTGTCTCAGATGTTCAACATGAAGGATTGAGCCGGGGCTTTGCATTCCTTGAGTTCTCTTGTCATGCTGATGCCATGATGGCATATAAGAGGCTTCAAAAGCCCGATGTCATCTTTGGCCATGCTGAAAGGACAGCTAAAGTAGCCTTTGCTGAACCCTTACGTGAGCCAGATCCAGAGGTAATGTCACAGGTAAAGTCTGTTTTTGTTGATGGTCTTCCTCCTCACTGGGATGAAGATCGTATCAGGGAGCAGTTCAAAGGTTATGGTGAAATTGTACGAATTGTCCTAGCCCGGAATATGTCTACTGCTAAGAGGAAAGATTTTGGGTTTGTTGATTTCTCTACCCATGAAGCTGCTGTAGCTTGCGTTGATGGTGTGAATACCTCTGAATTGGCTGATGGGGCATCAAAGATAAAAGTGAGGGCTAGGCTTTCAAATCCTTTGCCTAAAACACAGGCTGTCAAAGGTGGCATGTGTGGTGGATTTCGAATTGGTCATGCCAGTAGTGGAGCCTTTCCAAGATTTGGAAGGGGTTTTGGGCGTGGAGGGCGTTCCTCTAACTGGGGAAATTTCAACAGGGACCGGAATAATTATCATGGTGGACGCAGTCAAATTGGAAGAATGGGTTTCCGGAATTTTAATAATGCATATCCAGATTTTCATCAGAGGCAATATGGTCCAAGAGGGGAAAGAAGGGGGCCTCTTAGGGGTGGACATTATCCAGGTGGTCAAGGAGCTCCCATTGCTGGTCCACCTGGACCTTATTATGATAGAGCATGGTATGGTGCTCCTGAGAGAGGCCCAGTGGAGCCTGTTCTCCCAAGGAGGCCATATTCACCTGAAGGACAGTTTGATAGGCCTTTCATGGGAAGGAATTTCGATGATCCGTATCTTTATGATGACAATGTACATGGGGAGAAACGGCCATTCTATATGACTGGCCCAGATCCTGATTACATGGGACCTAGCAGACTTCGTCCTCGATTGGATTATACAGATCCAGCTTTATTTCATCATGGACCTCAATACCATGATTCTTTTGGGGCTGGAAGCAGACAGTATTCACATGATTATTATGGTCCTGATTATGGTGGAGGTCCTTATTCATCTTTTTATGGGGGTAATAGCTCATATGGACGTGGATACTACTATTAGATTGAAGAACCTTGAGGTGGGCTTGGAATTGTGCGATGGACTTCTTCAATGATGAGCACATGCCTTGCTGCTTGCATAAAATATGGAATTTGCATATTTCTTTTTCATCATCTTCTCTCTGCTCTTATTCCTACTCGATCTGTTTTAACTTTCATTTTTATTTTTTATTTTGGTCTATTAGATTATAGGTGATAGAACTGGTCATTTTGTTTATCTAGGCTAGGTCTCTTCAGGTCCTGAAGTTAGACCTTCATATGATCTTGTATGATGGACAGTAGGCTAGATCTCCTTTGCTTAGATTTGATGAGATTGAGGACTTGTATTTTGGGGATGTTTTGTTCAATGTACAATGTTTGAATGCTCAAGAATAATATTGATGATCGGGAGGTATATAGGTAACTGATCAACTGGAAGAAAGAATTTCAGGGGAAGGATTCATCTTTTCGCAAATTGTTGAGCAAGGGTTGAGATTTGAAATAAATATGGAGTCTCTTGTGACTCATGAAGGTTCTGGAGAGTTAAATTCATTTACAGTTCACTTCCTTGATTAGGAGCCGTATCATATTAATCTGAACTGAAGGTGTAACCATTCTGTTAGAGTTCTTTTTATTGAGTGGGATTTCTTTTGATATTTAATAATGTCAATCTGGAAGCAGCCTTTCTATGGCATACTTTATTGGGGATGAAATTTGCTTGAAGTTCAGAATATGGGCTAATACAATGAAATGTTCCCAATCGTCATTTAGAATGGTGATCATGGATGCTGTTATGGAGCAAACAATCTATCAGATTGATTTGTGTCTCTGATACATCATTGTTAATTTGGGTATCCTTGAGGATGTCTCCATGATTTTGATTTGTTGAGGTAGCGTTATTTTAGAATATTACATTTTCGTTAGTATCAAATGTACGGACTTTTAAGGATGAAGTACGTTGCCGTTTTAATTACTGAAATTTTCTGGGATGGTTTTGTTGCAATGATATTGGTTTGAAGGCTATTAGGCTTTTTGTCTTTCTGCACTTTCAAAGAATTTCTGGTGGTTCAAATACATGCTTATTTATTTGATCTTGAAGTTGGATCCAGAAAATTAGGATGTGATTTGTTTGCATTGATGGTAGATAGTGGATTGGATTTTGCGCAGATTAGTTTGGCTTTAGCATGGACCTTCTTTTTCATCATAAGTTATGCCGTGCTTCGAGTTCTAGTTTCTTTACACTGAGGAAATAGCAATGTTAATGACTACAAGAATCTCCTTGAGTTTTGAAGTTTGCATCTGAAACAAAAGAAAGACTTAAATTTTTTCACATCAGTATCAAAGATAGATTGAGAGTAACTGAGTGATGACCGTTAAGATATACATGCTTTGATTTTTTTGTTGATCTATATGAAATACCATTTTGTGTTAGACAGACACATGATCATTGCATTGCTGAATTTTAGCCATGATAGGAAGTCTGAGCTGCGGAGTTAATGATTGCAATGTACTTCCTATCATTGCTAAAATTCAGCAATGTAATGATATATATCATGCTTTAGTCCTCTGGTTCTCTTGTCAGTTTTGAATTTCTTCAAGTTTTCAGCACAGATATTGTCGGTAATGATTGCAATGTGTTGGTGTTGCCACACACTGTTTTATTGGTTGAATCCCATCAATGCCGGTGCCGTTAATCTGGTATGCTTTATGCAGAACATACACAATTGTAATTACTATATTCTTTCTGGAATTGATCATAGAAGACTTGAATTTAGTATGGTAGGTTAATTATAGTTCTGCATGATGCTTTCTGGATCTTGTATTTAAGAGAAGCAGTTCTTGACATAAATCAGATTCATCAACACAACACGATATATGAAAATATGAATCGGGC 4558 0.403 MRTRNADSSKSATVKKTPPARKSATKTPTTPSNSAGESATPKSSGTKRTASTKTRQAKKNEASLKPNTTSDSKPELSSDIVAKEAKTSPDASSVAPGTKVATTTKSAVKRTPGRTRTPTKAVSTPKPAEQVEIGADETPKADNFEAEEKSEEPRNVEVAHSDVLESEKEGEQDNEVIEQLAEKEQKPIEVDEPVLENVCESVEKEKSIVEIEVSTSHDSSYSLKLEKPTFLELTKPAEDEDSAGAKVAEKAEEGEGEKAKEESKEEETNNIGDKEACNTEFIIIEEKDQLKKGEGKPEKVNIGDDEEMQGCDEKLDLGEQGDEDLIEDYSEEPLEETETLEEERWELTAIAKERKIKKEHEIFVGGLDRDATEEDLKKVFERIGEVVEVRLHKNASTNKNKGYAFVKFADKEHAKKALSEMKNPVIHGKRCGTAPSEDNDTLFLGNICNTWTKEAIKQKLKDYGVEGVEKITLVSDVQHEGLSRGFAFLEFSCHADAMMAYKRLQKPDVIFGHAERTAKVAFAEPLREPDPEVMSQVKSVFVDGLPPHWDEDRIREQFKGYGEIVRIVLARNMSTAKRKDFGFVDFSTHEAAVACVDGVNTSELADGASKIKVRARLSNPLPKTQAVKGGMCGGFRIGHASSGAFPRFGRGFGRGGRSSNWGNFNRDRNNYHGGRSQIGRMGFRNFNNAYPDFHQRQYGPRGERRGPLRGGHYPGGQGAPIAGPPGPYYDRAWYGAPERGPVEPVLPRRPYSPEGQFDRPFMGRNFDDPYLYDDNVHGEKRPFYMTGPDPDYMGPSRLRPRLDYTDPALFHHGPQYHDSFGAGSRQYSHDYYGPDYGGGPYSSFYGGNSSYGRGYYY 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00719 857 Gene3D - 439 524 IPR012677 -
Bach4g00719 857 CDD RRM_SF 442 505 - -
Bach4g00719 857 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 362 430 IPR000504 GO:0003723
Bach4g00719 857 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 442 510 IPR000504 GO:0003723
Bach4g00719 857 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 540 604 IPR000504 GO:0003723
Bach4g00719 857 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 360 438 IPR000504 GO:0003723
Bach4g00719 857 SMART rrm1_1 441 518 IPR000504 GO:0003723
Bach4g00719 857 SMART rrm1_1 361 434 IPR000504 GO:0003723
Bach4g00719 857 SMART rrm1_1 539 614 IPR000504 GO:0003723
Bach4g00719 857 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 440 525 IPR000504 GO:0003723
Bach4g00719 857 MobiDBLite consensus disorder prediction 1 174 - -
Bach4g00719 857 MobiDBLite consensus disorder prediction 692 724 - -
Bach4g00719 857 MobiDBLite consensus disorder prediction 1 51 - -
Bach4g00719 857 FunFam Heterogeneous nuclear ribonucleoprotein Q 315 434 - -
Bach4g00719 857 Gene3D - 527 684 IPR012677 -
Bach4g00719 857 Gene3D - 319 434 IPR012677 -
Bach4g00719 857 MobiDBLite consensus disorder prediction 61 76 - -
Bach4g00719 857 FunFam Heterogeneous nuclear ribonucleoprotein Q 525 675 - -
Bach4g00719 857 CDD RRM_SF 362 431 - -
Bach4g00719 857 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 239 857 - -
Bach4g00719 857 MobiDBLite consensus disorder prediction 133 167 - -
Bach4g00719 857 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 538 618 IPR000504 GO:0003723
Bach4g00719 857 MobiDBLite consensus disorder prediction 231 277 - -
Bach4g00719 857 MobiDBLite consensus disorder prediction 91 124 - -
Bach4g00719 857 FunFam Heterogeneous nuclear ribonucleoprotein Q 440 524 - -
Bach4g00719 857 SUPERFAMILY RNA-binding domain, RBD 435 507 IPR035979 GO:0003676
Bach4g00719 857 CDD RRM_SF 540 614 - -
Bach4g00719 857 SUPERFAMILY RNA-binding domain, RBD 361 606 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00719 Bach-Chr4 4768235 4774315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00719 362 606 Eukaryotic Initiation Factors Gene Family AT2G23350 25.197 4.91e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00719 - - qsa:O6P43_024847 997.267