Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00718 GCGTATTTGTGTTACTTTGATCGGAGATGTCTTCCACCGGAGAAGGAGATGCTGCTCCCGCCGTTGAACAACCACCCGCGGAGGAGGTGAAGGCACCGCAGGAGGCTAAGCCAGTGAAGGAGAAGAAGCCCAGACAGCCCAAAACTGTTGCTCATCCTCCGTACTTTCAGATGATCGAGGAGGCCTTGTTGGCCCTCAAGGATAAGGGTGGTTCCAGTCCATATGCCATAGCCAAGTACATGGAGGAGAAGCATGAGTCAGTGCTCCCTGCGAATTTCAGGAAGATTCTGGCTCTGCAGCTAAAGAACCAAGCTGCGAGAGGAAAGCTCGTAAAGATTAGGGCTTCGTACAAGCTAGCTGAGGCTGCCAAGAAGGAGAAGGAGGAAAATAAGAAGGAGACAAGATCCGCGACAGAGAAGAAAGAGCGGCCCAAACGAAAAGCTACGATCACCACAGCTGCTGCTGCTGCTACTGCTACAAAGAAAACAGAGACCACGAACAAGGTTGCCAAGCCTGCAAAGAGAGGTGGGGTGAAGAAGACGAAGAAGACGACACCTGCAAAACCCAAAGTGCCAAAGTCTTTGAGGTCTCCTTCCAAAAGGACAAGGAGAGCCATTGCTGCATGATGCAAATAATGTTATTAGAGCAACTTTGTATCATATGTGAATATGAAACGTTTAGCTTTTCCCGGATGCACAAATTTGAATAGTGTCATGTAATAATGTAATTTTGGTTGTAATGGAGATAGCCTATGAGGATAAAATTCTGAAAAAAGTATGAAAGTTTTGACAGAAG 795 0.4704 MSSTGEGDAAPAVEQPPAEEVKAPQEAKPVKEKKPRQPKTVAHPPYFQMIEEALLALKDKGGSSPYAIAKYMEEKHESVLPANFRKILALQLKNQAARGKLVKIRASYKLAEAAKKEKEENKKETRSATEKKERPKRKATITTAAAAATATKKTETTNKVAKPAKRGGVKKTKKTTPAKPKVPKSLRSPSKRTRRAIAA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00718 199 MobiDBLite consensus disorder prediction 164 199 - -
Bach4g00718 199 PRINTS Histone H5 signature 164 181 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach4g00718 199 PRINTS Histone H5 signature 29 50 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach4g00718 199 PRINTS Histone H5 signature 130 144 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach4g00718 199 PRINTS Histone H5 signature 56 73 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach4g00718 199 MobiDBLite consensus disorder prediction 24 39 - -
Bach4g00718 199 Gene3D - 37 127 IPR036388 -
Bach4g00718 199 MobiDBLite consensus disorder prediction 113 139 - -
Bach4g00718 199 Coils Coil 101 134 - -
Bach4g00718 199 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 42 112 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach4g00718 199 MobiDBLite consensus disorder prediction 113 199 - -
Bach4g00718 199 CDD H15 40 110 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach4g00718 199 Pfam linker histone H1 and H5 family 43 109 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach4g00718 199 SMART h15plus2 40 107 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach4g00718 199 MobiDBLite consensus disorder prediction 1 45 - -
Bach4g00718 199 SUPERFAMILY "Winged helix" DNA-binding domain 39 123 IPR036390 -
Bach4g00718 199 PANTHER HISTONE H1 18 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00718 Bach-Chr4 4766261 4767471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00718 44 110 Single Myb Histone (SMH) Gene Family AT1G72740 44.776 5.78e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00718 K11275 - gmx:100500169 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00718 4 4766261 4767471 Bach4g00718 4 4766261 4767471 ECH