Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00703 GACCCGTTCAGCCCTCATTCAATGCTTTACCAAACTCCCCATCCTCTTTGCTTTCAATTTCAACCCCTCGCTTCTTCCACCCCTGAATTTGCAGCCACATCATCTCTCTCCTCTGCTTCTCTCTTTTCTCATCTTCCCCTGCTTAAGGCTGAAACAGAAATGGAGTGCGTGGAAGCTGCAGCGTTGAAGACCAGTTTAAGAAAAGACATGACCATGAAATTAAGCCCACAAGCCTTTATGGAGGAGTCGTCGGTGTTTAATCTGCAAAATGGTGCTCCTTCCGATGACTTTTTTGTGGACGACCTTTTTGACTTTTCGCATGAAGAAGCCCTTATCCAAGAACAACAACCAGAAGAAGAGGAATACAAGGGTACCGCTGTCTCTGTTTCAACTCAACAGGAGAACCAAAGCCCTGAAATATCTTACACTGGTACGCTCAAAGAAGAATTTGGGTGTGTGCCTACCAGCGAACTGAGCGTTCCGGCGGATGATTTGGCAGACTTAGAGTGGTTATCTCATTTCGTTGAGGATTCCTTCTCAGAATACTCAGCTGCGTACCCCATTGGAATTATAACGGAGAAACCCGATAGCCATGCAGAGAAAGAGCCTGAACCGGGAAGCCCTGTTTTGACTCAATCCTGTTTTAAAACTCCGGTTCCGGCTAAGGCCAGAAGCAAGCGAACAAGGACAGGGGTTCGGGTTTGGCCACTTGGGTCTCCTTCGTTCACTGAATCATCGTCAACCTCTTCCTCTTCATCGTCCTCTTCGTCCCCCCAGAGCCCTTGGTTAATTTTCACCAATACGAACCAGGGCCTCGAGCAGGTTTCGTCGGAAGCCAAACCCCCAGCGAAGAAACCAAAGAAAAAGCCGGTGTCCGACGGGACGGGGAGCGGTGGGGGTCAGACTCCTCGACGGTGCACCCATTGTGGTGTTCAGAAGACGCCACAGTGGCGAACCGGGCCACTTGGAGCCAAAACACTTTGTAACGCATGTGGGGTCCGGTACAAGTCGGGTCGACTCTTACCCGAGTATAGACCAGCATGTAGCCCGACATTCTCGAGTGAATTGCACTCAAACCACCACCGTAAAGTGCTAGAAATGCGGCTGAAGAAGGAGGAATTTGGTGGAATTGAGTCCGGTTTGACCTCTCCTCCGGCTGTCCGCAGTTTTTGA 1173 0.5021 MLYQTPHPLCFQFQPLASSTPEFAATSSLSSASLFSHLPLLKAETEMECVEAAALKTSLRKDMTMKLSPQAFMEESSVFNLQNGAPSDDFFVDDLFDFSHEEALIQEQQPEEEEYKGTAVSVSTQQENQSPEISYTGTLKEEFGCVPTSELSVPADDLADLEWLSHFVEDSFSEYSAAYPIGIITEKPDSHAEKEPEPGSPVLTQSCFKTPVPAKARSKRTRTGVRVWPLGSPSFTESSSTSSSSSSSSSPQSPWLIFTNTNQGLEQVSSEAKPPAKKPKKKPVSDGTGSGGGQTPRRCTHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRLKKEEFGGIESGLTSPPAVRSF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00703 383 Pfam GATA zinc finger 299 333 IPR000679 GO:0006355|GO:0043565
Bach4g00703 383 MobiDBLite consensus disorder prediction 232 269 - -
Bach4g00703 383 FunFam GATA transcription factor 290 372 - -
Bach4g00703 383 ProSitePatterns GATA-type zinc finger domain. 299 324 IPR000679 GO:0006355|GO:0043565
Bach4g00703 383 SMART GATA_3 293 347 IPR000679 GO:0006355|GO:0043565
Bach4g00703 383 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 293 354 - -
Bach4g00703 383 Gene3D - 291 366 IPR013088 GO:0006355|GO:0008270
Bach4g00703 383 PANTHER GATA TRANSCRIPTION FACTOR 82 365 - -
Bach4g00703 383 MobiDBLite consensus disorder prediction 288 306 - -
Bach4g00703 383 CDD ZnF_GATA 298 346 IPR000679 GO:0006355|GO:0043565
Bach4g00703 383 MobiDBLite consensus disorder prediction 189 306 - -
Bach4g00703 383 ProSiteProfiles GATA-type zinc finger domain profile. 293 329 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00703 Bach-Chr4 4654732 4656095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00703 50 383 C2C2-Gata Transcription Factor Family AT5G66320 52.601 3.47e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach4g00703 GATA 9.5e-16 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00703 4 4654732 4656095 Bach10g00585 10 4170213 4171566 BWGD
Bach10g00585 10 4170213 4171566 Bach4g00703 4 4654732 4656095 ECH
Bach4g00703 4 4654732 4656095 Bach4g00703 4 4654732 4656095 ECH