Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00699 ATGGGTCGTGGAAAGATTGAGATCAAGTTGATTGAGAACCCAACCAATAGGCAAGTCACTTACTCGAAGCGACGTAATGGGATCTTCAAGAAAGCTCATGAACTCAGCGTTCTCTGTGATGCTAAGGTCTCCCTCATCATGTTCTCTAGAAACAACAAGATGCACGAATACATCAGCCCTGGCCTTACGACCAAGAAGGTCATCGATCAGTACCAGAAGAATATGGGGAATGTTGATCTTTGGCGTGCTCACTACGAGAAAATGCTTGAAAATTTGAAGAAACTGAAAGATATAAATGATAAACTTCGAAGACAGATCAGGCAAAGGATGGGTGAAGATCTGGACGATCTCGGCTTTTCCCAACTACGCAATCTTGAGGATGATGTGGTTTCTTCCATAGGGGTCATACGTAATCGAAAGAACCATGTGATAAAAAATCGGACTGACACCTGTAAGAAAAAGGTTAGAAGCTTGGAGCAGTTAAACGCAAATCTGCTGCTATGCATTAAGGAAAAAGGTGTTGTGATTCATCCACAGTATGGTTTTCTGCACGATGAAATTGAAGGAGGAGATCCAGAATCACAGGTTGCATTAGCCAATGGTGCCTCCAACCTCTTTGCCTTCTGCCAGCACCATAGCCATCTCAGTCTTCACCCCCACCACCATGGAGTAGGATTCAAATCGGATGATCTGCGCCTTGCTTGA 705 0.4411 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSRNNKMHEYISPGLTTKKVIDQYQKNMGNVDLWRAHYEKMLENLKKLKDINDKLRRQIRQRMGEDLDDLGFSQLRNLEDDVVSSIGVIRNRKNHVIKNRTDTCKKKVRSLEQLNANLLLCIKEKGVVIHPQYGFLHDEIEGGDPESQVALANGASNLFAFCQHHSHLSLHPHHHGVGFKSDDLRLA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00699 234 Pfam K-box region 84 166 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach4g00699 234 SUPERFAMILY SRF-like 2 96 IPR036879 GO:0003677|GO:0046983
Bach4g00699 234 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach4g00699 234 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach4g00699 234 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach4g00699 234 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach4g00699 234 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach4g00699 234 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 57 IPR002100 GO:0003677|GO:0046983
Bach4g00699 234 Coils Coil 85 112 - -
Bach4g00699 234 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Bach4g00699 234 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach4g00699 234 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 197 - -
Bach4g00699 234 Gene3D - 14 102 IPR036879 GO:0003677|GO:0046983
Bach4g00699 234 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00699 Bach-Chr4 4635746 4637112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00699 1 221 MADS-box Gene Family AT3G54340 47.511 7.68e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach4g00699 K-box 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00699 K09264 - gmx:100784496 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00699 4 4635746 4637112 Bach4g00699 4 4635746 4637112 ECH