Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach4g00699 | ATGGGTCGTGGAAAGATTGAGATCAAGTTGATTGAGAACCCAACCAATAGGCAAGTCACTTACTCGAAGCGACGTAATGGGATCTTCAAGAAAGCTCATGAACTCAGCGTTCTCTGTGATGCTAAGGTCTCCCTCATCATGTTCTCTAGAAACAACAAGATGCACGAATACATCAGCCCTGGCCTTACGACCAAGAAGGTCATCGATCAGTACCAGAAGAATATGGGGAATGTTGATCTTTGGCGTGCTCACTACGAGAAAATGCTTGAAAATTTGAAGAAACTGAAAGATATAAATGATAAACTTCGAAGACAGATCAGGCAAAGGATGGGTGAAGATCTGGACGATCTCGGCTTTTCCCAACTACGCAATCTTGAGGATGATGTGGTTTCTTCCATAGGGGTCATACGTAATCGAAAGAACCATGTGATAAAAAATCGGACTGACACCTGTAAGAAAAAGGTTAGAAGCTTGGAGCAGTTAAACGCAAATCTGCTGCTATGCATTAAGGAAAAAGGTGTTGTGATTCATCCACAGTATGGTTTTCTGCACGATGAAATTGAAGGAGGAGATCCAGAATCACAGGTTGCATTAGCCAATGGTGCCTCCAACCTCTTTGCCTTCTGCCAGCACCATAGCCATCTCAGTCTTCACCCCCACCACCATGGAGTAGGATTCAAATCGGATGATCTGCGCCTTGCTTGA | 705 | 0.4411 | MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSRNNKMHEYISPGLTTKKVIDQYQKNMGNVDLWRAHYEKMLENLKKLKDINDKLRRQIRQRMGEDLDDLGFSQLRNLEDDVVSSIGVIRNRKNHVIKNRTDTCKKKVRSLEQLNANLLLCIKEKGVVIHPQYGFLHDEIEGGDPESQVALANGASNLFAFCQHHSHLSLHPHHHGVGFKSDDLRLA | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach4g00699 | 234 | Pfam | K-box region | 84 | 166 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bach4g00699 | 234 | SUPERFAMILY | SRF-like | 2 | 96 | IPR036879 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 11 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | Coils | Coil | 85 | 112 | - | - | |
Bach4g00699 | 234 | CDD | MADS_MEF2_like | 2 | 77 | IPR033896 | GO:0000977|GO:0045944 | |
Bach4g00699 | 234 | ProSiteProfiles | K-box domain profile. | 85 | 175 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bach4g00699 | 234 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 3 | 197 | - | - | |
Bach4g00699 | 234 | Gene3D | - | 14 | 102 | IPR036879 | GO:0003677|GO:0046983 | |
Bach4g00699 | 234 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach4g00699 | Bach-Chr4 | 4635746 | 4637112 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach4g00699 | 1 | 221 | MADS-box Gene Family | AT3G54340 | 47.511 | 7.68e-66 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MADS-MIKC | Bach4g00699 | K-box | 2.1e-20 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach4g00699 | K09264 | - | gmx:100784496 | 321.627 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach4g00699 | 4 | 4635746 | 4637112 | Bach4g00699 | 4 | 4635746 | 4637112 | ECH |