Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00649 CTGGACTCTGCCGGTGGTGTTGGGGCTGTTGCCGGAGAAAGCCCTGGGTAGTCGATCCTCTATTTCCGCTAGAAATCTAGAGCATATGAGCATCTTTTCTGGGGTTTGGCCGTGTTTCTCCAATTTGATGGGCATTACTGGATCCGGAGCCTAAAGGGTCTGATACTGGTCGCTTTTCTTCTCATGATTTCCATCCAAGTTCCTGGATATTTTGAGCTGATTTGGTGCGATTGATCTAGTCATTTTCGGCTTCAATTTCACAGTTTTGTGTTGGAAGGAAGATTGATATGCTGAGTAAACATGTCACTGAAAAGCTTAGTTCGTGAATTGAAGGAGATGAAAGATGGCATGGGCAGCATATCAAGGCGAGTTGCAGAAGGAAAGCAATGGCACAGTCGGTCAAAGTCACATGTTGCTCCTGATAGCCCTCTACCTACACCTGAACCTGTACAACAGGGACAATGGGCAAATCTACCACCTGAACTACTTTTGGACATAATCCGGAGAGTAGAAGAAAGTGAAAAATCTTGGCCTGCACGGGCAGTCGTTGTTTTTTGTGCTTCAGTATGTAAATCATGGAGAACCATCACTAAGGAGATCGTCAAAACTCCTGAGCAATGTGGGAGGCTTACATTTCCTATCTCATTGAAGCAGCCGGGTCCTCGGGATTCTGCAATACAGTGCTTCATCAGGAGGAACAGAGAAACTTCTACATATATATTGTACTACGGTCTGGTGCCATCGGAAAATGAGAATGATAAGTTGCTGTTAGCTGCCAAAAAGATAAGAAGAGCAACAGGCACAGACTTTGTGATATCTTTGGTTTCAGATGATTTTTCTCGGGCCAGCAACACATATGTTGGTAAATTGAGGTCTAATTTTTTGGGTACCAAGTTCACCATATATGACAGCCAACCTCCGCTTGAAGCTGGAGTTCAACTAAATAATCGTTCTAGTCGAAGGTTTCACTCTAAGCAGGTATCTCCAAGAGTTCCAGCATGTAATTACAATGTTGGCACCATTTCCTATGAGCTCAACGTTCTCCGTACCAGAGGACCAAGAAGAATGCGTTCCGTCATGAACTTCATACCTGTCTCAGCTATTCAGGAAGGGGGCAATGCCCCTACACCAGCATCATTTCCTCATATTGATGAGCAAATTTCTGTCTCGCCAGCATTGAAAGGGAAAGATCCCCTTGTAGATTCCAGCTCTGCAAATCTCTCTGAACCACCAGTGTTGAGCCAGGTTTCGGTTGAGCCCCTCGTGCTTAAAAATAAGGCTCCCAGATGGCATGAGCAGCTGCAGTGCTGGTGCCTTAACTTCAAAGGTCGTGTAACAGTGGCTTCTGTTAAGAATTTTCAGCTTGTGGCTGCTGTTGATCCCTCGCATAATGTTTCTGCTGCAGAACAAGACAAGGTAATCTTGCAGTTCGGAAAGATTGGAAAAGACATATTTACAATGGATTACCGTTATCCACTCTCTGCCTTCCAAGCCTTCGCCATTTGCTTGAGCAGCTTTGATACCAAACCTGCCTGTGAATGATACCCCATGTTGCTTGAGATTGTGATCTTCATCTGGTGATTTGTTCCATATATATATATATAGTATGCTAGGCACAGTTGATCAAGCATGGTGATATGCAGTGCGGTCATTAGCACTTTGTGGTAGTCGTTGATCATGGAATATAATCTGTATGTTGTTTCATAATCCTTGTCACTACTACAATTAAATTAAACGAATTTTA 1744 0.4381 MGSISRRVAEGKQWHSRSKSHVAPDSPLPTPEPVQQGQWANLPPELLLDIIRRVEESEKSWPARAVVVFCASVCKSWRTITKEIVKTPEQCGRLTFPISLKQPGPRDSAIQCFIRRNRETSTYILYYGLVPSENENDKLLLAAKKIRRATGTDFVISLVSDDFSRASNTYVGKLRSNFLGTKFTIYDSQPPLEAGVQLNNRSSRRFHSKQVSPRVPACNYNVGTISYELNVLRTRGPRRMRSVMNFIPVSAIQEGGNAPTPASFPHIDEQISVSPALKGKDPLVDSSSANLSEPPVLSQVSVEPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVDPSHNVSAAEQDKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00649 397 MobiDBLite consensus disorder prediction 1 37 - -
Bach4g00649 397 CDD F-box_AtTLP-like 39 83 - -
Bach4g00649 397 Gene3D - 32 86 - -
Bach4g00649 397 FunFam Tubby-like F-box protein 96 397 - -
Bach4g00649 397 Pfam Tub family 100 392 IPR000007 -
Bach4g00649 397 PANTHER TUBBY-RELATED 34 395 - -
Bach4g00649 397 ProSitePatterns Tub family signature 2. 382 397 IPR018066 -
Bach4g00649 397 ProSitePatterns Tub family signature 1. 325 338 IPR018066 -
Bach4g00649 397 SUPERFAMILY Tubby C-terminal domain-like 88 397 IPR025659 -
Bach4g00649 397 PRINTS Tubby superfamily signature 154 170 IPR000007 -
Bach4g00649 397 PRINTS Tubby superfamily signature 325 341 IPR000007 -
Bach4g00649 397 PRINTS Tubby superfamily signature 354 373 IPR000007 -
Bach4g00649 397 PRINTS Tubby superfamily signature 170 194 IPR000007 -
Bach4g00649 397 PRINTS Tubby superfamily signature 307 324 IPR000007 -
Bach4g00649 397 PRINTS Tubby superfamily signature 219 246 IPR000007 -
Bach4g00649 397 PRINTS Tubby superfamily signature 375 397 IPR000007 -
Bach4g00649 397 Gene3D Tubby Protein; Chain A 97 397 IPR025659 -
Bach4g00649 397 Pfam F-box domain 39 86 IPR001810 GO:0005515
Bach4g00649 397 SUPERFAMILY F-box domain 33 82 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00649 Bach-Chr4 4344657 4347705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00649 1 397 TUB Transcription Factor Family AT2G18280 63.980 2.86e-178 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bach4g00649 Tub 1.6e-106 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00649 K19600 - gmx:100798958 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00649 4 4344657 4347705 Bach10g00552 10 3965124 3968025 BWGD
Bach4g00649 4 4344657 4347705 Bach4g00649 4 4344657 4347705 ECH
Bach10g00552 10 3965124 3968025 Bach4g00649 4 4344657 4347705 ECH