Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00644 ATGGAAATGAGAGGCCAAGATAAGGAAATAGAGATGCCAACAACTTTGGGTTATAATCCCAATCCCCCTCAAAGGGATTCCTCTTCCAAGCTCTCTTCTTCAACTCTAGCTTCCACCATAGCGGAAAGAAGTGATCATGAACCTCCACAAACTCACACAATCTTGCTACCTTCAGAGCACCATAATCTTTATCACCCTCCTCCTCCTCCTCCTCCACTTCAGCAATTGCAGAGACCCAGAAGAGATCCAGATCCAAGCTCATCTCCTATTGCCACTACAAGTGCAATCAACGCCCCGATTGCAGCAAGAGCAGCACCTTCACCGCAGCCGCCACCTCCCACACATACAGGAGAAACAACAACCTCGACAATCTCGACCCCGTTGATTAGGTACCGAGAATGTCTGAAAAATCACGCAGCGAGCATGGGGAGTCATGTAGTGGATGGCTGCGGCGAGTTCATGCCAAGCGGAGAAGAGGGCACCCCCGAATCCTTAAGATGTGCTGCTTGTGAGTGTCACCGGAATTTTCACCGAAAAGAGGCTGAAGGGGAAACTCAGCATGTTTCCAATTATTACAGTTATCCCAACAAAAGCAACGATCAAAATAGGATACCTTCCCCTCATCATCGTTCTCAATATCCTCAATTTTCTACTGTGCCCCCTTCTCTCCATCAACATCATAGGTTCTCTCATGGGTTCGGCGCCACCCCTTCAGCCGGTCTGATTCCTCCGATGATGATGGCCTTCGGCAGCGGGGGAGGCCCGGCAGAGTCTTCCAGTGAAGATCTCAACATGTTTCAGTCTAATGCCGGAGGCCAATCATCAGTGCAGCCACCACTATCAAAGAAGAGGTTCCGGACCAAGTTTACCCAGCAACAAAAGGATAAGATGATGGAATTTGCTGACAAGTTGGGGTGGAAGATCCAGAAACATGATGAGCAGGAGGTGCATCAATTTTGTTCTCAAGTGGGTGTGAAAAGGCAGGTTTTCAAGGTTTGGATGCACAATAACAAACAAGCCATGAAGAAGAAGCAAGTGTAA 1041 0.4841 MEMRGQDKEIEMPTTLGYNPNPPQRDSSSKLSSSTLASTIAERSDHEPPQTHTILLPSEHHNLYHPPPPPPPLQQLQRPRRDPDPSSSPIATTSAINAPIAARAAPSPQPPPPTHTGETTTSTISTPLIRYRECLKNHAASMGSHVVDGCGEFMPSGEEGTPESLRCAACECHRNFHRKEAEGETQHVSNYYSYPNKSNDQNRIPSPHHRSQYPQFSTVPPSLHQHHRFSHGFGATPSAGLIPPMMMAFGSGGGPAESSSEDLNMFQSNAGGQSSVQPPLSKKRFRTKFTQQQKDKMMEFADKLGWKIQKHDEQEVHQFCSQVGVKRQVFKVWMHNNKQAMKKKQV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00644 346 Gene3D - 267 343 - -
Bach4g00644 346 MobiDBLite consensus disorder prediction 181 214 - -
Bach4g00644 346 Pfam ZF-HD protein dimerisation region 129 181 IPR006456 -
Bach4g00644 346 MobiDBLite consensus disorder prediction 1 125 - -
Bach4g00644 346 MobiDBLite consensus disorder prediction 80 95 - -
Bach4g00644 346 MobiDBLite consensus disorder prediction 62 78 - -
Bach4g00644 346 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 131 180 IPR006456 -
Bach4g00644 346 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 110 339 - -
Bach4g00644 346 SUPERFAMILY Homeodomain-like 271 343 IPR009057 -
Bach4g00644 346 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 130 180 IPR006456 -
Bach4g00644 346 MobiDBLite consensus disorder prediction 186 214 - -
Bach4g00644 346 MobiDBLite consensus disorder prediction 17 41 - -
Bach4g00644 346 FunFam Zinc-finger homeodomain protein 2 269 343 - -
Bach4g00644 346 NCBIfam homeobox domain, ZF-HD class 282 339 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00644 Bach-Chr4 4306550 4307590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00644 40 346 ZF-HD Transcription Factor Family AT2G18350 43.226 9.46e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach4g00644 ZF-HD_dimer 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00644 - - qsa:O6P43_033701 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00644 4 4306550 4307590 Bach10g00548 10 3928036 3929079 BWGD
Bach4g00644 4 4306550 4307590 Bach4g00644 4 4306550 4307590 ECH
Bach10g00548 10 3928036 3929079 Bach4g00644 4 4306550 4307590 ECH