Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00641 ATGATGCATCGTTGCAGCAGCGCTCAGGGGCACGTGATGGGACCTTGTCCATGTGGTTTGTTTCACAGTCAAACAAATTCCTTCTCCATGCTATTCTCAATGCCCAACCACAAACCCTATGATCAGTATGATGAATCCGACATGTATTCTTCCACCCCCTCATCGTCTTCCGTGGACTGCACGCTCTCTCTAGGCACCCCGTCCACGCGTTTTACTGAAGACGAAGAAAAGCGTAACCGCCATGAACGTCGCAATTCCGTTTCCAACTTCTGCTGGGATTTATTACAATCCAAACAGAATCCACAGTCCCACAGCAAGTCCAACCGAGGACCCACCAATAGTAGCAACTCCACCAATGATCCTCTCCTTGCTCGTCGCTGCGCCAACTGTGACACCACTTCCACACCCCTTTGGAGAAATGGCCCTAGAGGACCAAAGTCATTATGTAATGCGTGTGGGATTAGATTCAAGAAGGAAGAGAGAAGAGCGAGCGCTGCCGCCGCCACAACCGGGGCTTCTTCTGGTGGCGTAATGGATTCGCAGCAGATGTACAACAATTCATGGTACCCACACTCGCAGAACCAGAAAACGCCGTGCTACTCACCGACATTGGGCAATGAGTTTCGCTTCGTCAACGACGGCGATCGAGACTCAGACAACGGCATGCCATTCCTCTCTTGGAGACTCAATGTCACAGACAGACCGAGCCTCGTCCACGACTATACGAGATGA 732 0.5137 MMHRCSSAQGHVMGPCPCGLFHSQTNSFSMLFSMPNHKPYDQYDESDMYSSTPSSSSVDCTLSLGTPSTRFTEDEEKRNRHERRNSVSNFCWDLLQSKQNPQSHSKSNRGPTNSSNSTNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAATTGASSGGVMDSQQMYNNSWYPHSQNQKTPCYSPTLGNEFRFVNDGDRDSDNGMPFLSWRLNVTDRPSLVHDYTR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00641 243 MobiDBLite consensus disorder prediction 98 122 - -
Bach4g00641 243 MobiDBLite consensus disorder prediction 44 83 - -
Bach4g00641 243 SMART GATA_3 121 173 IPR000679 GO:0006355|GO:0043565
Bach4g00641 243 CDD ZnF_GATA 126 158 IPR000679 GO:0006355|GO:0043565
Bach4g00641 243 Gene3D - 123 197 IPR013088 GO:0006355|GO:0008270
Bach4g00641 243 PANTHER GATA TRANSCRIPTION FACTOR 18 10 243 IPR044272 GO:0003700|GO:0009908
Bach4g00641 243 ProSitePatterns GATA-type zinc finger domain. 127 152 IPR000679 GO:0006355|GO:0043565
Bach4g00641 243 MobiDBLite consensus disorder prediction 45 69 - -
Bach4g00641 243 ProSiteProfiles GATA-type zinc finger domain profile. 121 157 IPR000679 GO:0006355|GO:0043565
Bach4g00641 243 Pfam GATA zinc finger 127 161 IPR000679 GO:0006355|GO:0043565
Bach4g00641 243 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 124 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00641 Bach-Chr4 4284968 4285805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00641 18 243 C2C2-Gata Transcription Factor Family AT3G50870 44.561 1.61e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach4g00641 GATA 5.8e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00641 - - gmx:100790571 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00641 4 4284968 4285805 Bach4g00641 4 4284968 4285805 ECH