Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00625 GCGACGCTATCTGTTTCTGTCGTTTTGCAGTTGACCGTGTTTTCTGTCATAATCTCAGATCTATTCCGGCTCCAATAGGTTCGCCATGGGAGACTACGACGATGCTTTCATGCGCAACCAGAACGCCGCCGTCCAGGCCCGTACCAAAGCACAGAACCGCGCCAATGTCCTTCAACTCAAGCTGATTGGACAAAGTCACCCAACTGGTCTCACAGCCAATCTTCTGAAACTTTTTGAGCCCAGGCCTCCATTAGAGTATAAGCCACCCCCGGAGAAAAGAAAATGTCCTCCATTAACCGGTATGGCACAATTTGTAAGTAAGTTTGCTGAGCCTGGAGATCCAGAATATGCTCTGCCTGTTCAAAAAGCTGAAACTCCTGCTCAAAGAAGAGCTAGAATACACAAGTTAAGACTGGAGAAAGGAGCAGCAAAGGCAGCAGAGGAGCTTGAAAAATATGATCCACGTAATGATCCAAATATATCAGGTGATCCATTCCGGACGCTGTTTGTTGCCAGACTTAGTTATGAAGCATCTGAGAGCAAAATGAAAAGGGAGTTTGAATCATATGGTCCAGTCAAACGGGTTCGATTGGTTACCGACAAAGTGACAAATAAACCTAAGGGTTATGCTTTCATTGAGTATGCGCATCAACGAGACATGAAAGCTGCTTATAAACAAGCTGATGGTAGGAAGATTGAGGGTAGAAGGGTGCTTGTGGATGTTGAACGTGGGAGGACTGTTCCAAATTGGCGACCTCGACGACTAGGTGGTGGGTTAGGTACTAGTAGAGTGGGGGCTGAAGAAGTTAGTCAGCGATATTCTGGGAGGGAACAAGTGCAGTCAGAACCTTCTCGTTCTGAAGAGCCAAAAGTGTGGGAGGATCGCCATGGTGACCGGGATAGAGAAAAATCTCGTGAAAGAGGCAGAGATAGAGATAGAGAAAGGGAGCAGTCTCGTGAACTCTCTCATGAAAGAGGTAGGGACAGGGATCGTGAGGATAGACACCACAGGGACCGAGACAGGAACAGGGACAAAGACAGGGATAGGGAAAGAGAAAGAGATCGAGGCCGTGACCGAGATAGAGCACGGGGTCGTGATCGTGATCGCGGTCGGGATAGAGATAGGGACCGTGATCGAGATCATGATCGTCACCGTGAGAGGGATAGGGATTATGAAGTTGGGGACCCTGATAGAGGACGCTCACATGATAAGGAGTATGATTATGATCGTGTTGAATCTAAACATGAGAGGGAGAGACACAGTGAAAAGGAGCGAGATTATGAACCTGAGGATGATCATGGGTGGTATAACCAACCTGAGTATGGAAACAGACATGCAGATCCTGATCATGATCTCAAGCAGCATGATCACTATGAGCATCATCGAGGAAGGAGCCATTACGATCATGGAGATGATCATGACCATTACCATCAATATCCCGACCATAACCGGATGGAAAATGACCACCATACAGAACGTGCAGCATCTGAATCCCAGGAAAGGGAGAGAAATCGTGATCCTCAGGAGTATGATTACTAGGAGTCTGAGCTTAGTATATCAACTTTGCTGGTAACATTTATGATATAAATTTGTGTACTGGTTGTGCTGGCATCATTATTTATGTGAATCTGGCTGTCCATTCCTGATTTGTTCTTGGAACTTGCTGATCACTTCAGGCATTGAACAATCCAAGCGCAAAAGGAAAAAAAGAGCTGACTTGCTACTGCTATCCATATATGTAGTGGTGGATTCTTATGTCCCTGTATGAAATACTGCTATGGCTTAAGAGAGTTGGTTGGTTGTTTCTGAATCTTAATGTTGGTTTTGGAGTGTTAGTACTGGTGCTGTTTGCGGGTTTTGTGACTGCTGTTCTTTTTCTTCAGACTATTTTAAGAAACATGGGTGGTTTTTTTTATTCTTATTTATTTTTTTTGGGCACAATTGTATGA 1950 0.4508 MGDYDDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPPLTGMAQFVSKFAEPGDPEYALPVQKAETPAQRRARIHKLRLEKGAAKAAEELEKYDPRNDPNISGDPFRTLFVARLSYEASESKMKREFESYGPVKRVRLVTDKVTNKPKGYAFIEYAHQRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGAEEVSQRYSGREQVQSEPSRSEEPKVWEDRHGDRDREKSRERGRDRDREREQSRELSHERGRDRDREDRHHRDRDRNRDKDRDRERERDRGRDRDRARGRDRDRGRDRDRDRDRDHDRHRERDRDYEVGDPDRGRSHDKEYDYDRVESKHERERHSEKERDYEPEDDHGWYNQPEYGNRHADPDHDLKQHDHYEHHRGRSHYDHGDDHDHYHQYPDHNRMENDHHTERAASESQERERNRDPQEYDY 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00625 484 Pfam U1 small nuclear ribonucleoprotein of 70kDa MW N terminal 41 129 IPR022023 -
Bach4g00625 484 MobiDBLite consensus disorder prediction 218 484 - -
Bach4g00625 484 CDD RRM_snRNP70 137 227 IPR034143 GO:0030619
Bach4g00625 484 MobiDBLite consensus disorder prediction 253 484 - -
Bach4g00625 484 Gene3D - 125 250 IPR012677 -
Bach4g00625 484 SUPERFAMILY RNA-binding domain, RBD 126 237 IPR035979 GO:0003676
Bach4g00625 484 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 140 209 IPR000504 GO:0003723
Bach4g00625 484 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 138 216 IPR000504 GO:0003723
Bach4g00625 484 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 59 338 - -
Bach4g00625 484 FunFam U1 small nuclear ribonucleoprotein 70 kDa 125 250 - -
Bach4g00625 484 SMART rrm1_1 139 212 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00625 Bach-Chr4 4172699 4177685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00625 138 213 C2H2 Transcription Factor Family AT2G19380 27.632 9.83e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00625 K11093 - sspl:121771453 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00625 4 4172699 4177685 Bach4g00625 4 4172699 4177685 ECH