Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00616 ATGACGACTCGACTAGCACCGGGAGTAGGAGCAAACTTGCTGGGCCAACACTCGGCGGAGAGGAATCAAGATGCCACTGCTTATGTCGGCAATCTCGATCCCCAGGTAACTGAGGAGTTACTCTGGGAGTTATTTGTTCAAGTTGGTCCAGTTGTTAATGTATATGTTCCGAAGGATAGAGTGACCAATCAACATCAAGGTTATGGATTTTTTGAATTCCGGAGTGAAGAAGATGCTGACTATGCCATCAAGGTTCTCAATATGATTAAACTTTATGGGAAACCTATACGTGTAAATAAGGCATCTCAAGATAAAAAGAGCTTGGATGTGGGAGCAAATCTTTTCATTGGAAACCTTGATCCAGATGTAGATGAGAAGCAATTGTATGACACTTTCAGTGCATTTGGAGTCATTGTTACAAATCCGAAGATCATGAGAGATCCCGAGACAGGAAATTCCCGTGGTTTTGGCTTTATAAGCTATGATTCATTTGAGGCGTCTGATGCAGCTATTGAGGTATTCCTTTGCTGA 531 0.4237 MTTRLAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQVGPVVNVYVPKDRVTNQHQGYGFFEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKQLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEVFLC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00616 176 Gene3D - 107 174 IPR012677 -
Bach4g00616 176 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 172 IPR000504 GO:0003723
Bach4g00616 176 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 97 IPR000504 GO:0003723
Bach4g00616 176 Gene3D - 16 106 IPR012677 -
Bach4g00616 176 FunFam Splicing factor 3b subunit 4 16 109 - -
Bach4g00616 176 CDD RRM1_SF3B4 28 100 IPR034158 -
Bach4g00616 176 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 103 IPR000504 GO:0003723
Bach4g00616 176 SUPERFAMILY RNA-binding domain, RBD 25 172 IPR035979 GO:0003676
Bach4g00616 176 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 176 IPR000504 GO:0003723
Bach4g00616 176 PANTHER SPLICING FACTOR 3B SUBUNIT 4 14 172 - -
Bach4g00616 176 SMART rrm1_1 26 99 IPR000504 GO:0003723
Bach4g00616 176 SMART rrm1_1 113 176 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00616 Bach-Chr4 4136641 4139298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00616 16 98 Eukaryotic Initiation Factors Gene Family AT4G34110 32.530 8.54e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00616 K12831 - mof:131154062 333.183