Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00614 ATGCCGGTTGATTTAGATAACTCTTCCACAGCTTCAGGGGAAGCTAGTGTCTCTTCCTCGGGCAATCAGACAGTACCGCAAAAGTCCACTGCAAAGAAAAAGAGAAACCTTCCAGGAATGCCAGATCCAGACGCAGAGGTGATTGCTCTGTCTCCGAAGGCCCTTTTGGCCACAAACCGATTTGTATGTGAAATTTGCAACAAAGGATTTCAGAGGGATCAAAATCTTCAGCTTCATCGACGAGGTCACAATCTGCCATGGAAGCTTAGGCAGAGGTCAAGCAAAGAGGTGAGAAAGAGAGTTTATGTCTGTCCAGAACCAACCTGTGTCCATCATGATCCCTCCAGAGCTTTGGGTGATCTCACTGGGATAAAGAAGCATTTCTGTAGAAAACACGGCGAGAAGAAGTGGAAATGCGATAAGTGTTCGAAGAAATATGCAGTGCAATCAGATTGGAAAGCTCACTCTAAAATTTGTGGTACCAGAGAGTACAAATGCGACTGTGGGACTTTGTTTTCGAGGAGGGATAGCTTTATCACGCACAGGGCGTTTTGCGATGCCTTGGCAGAGGAGAGTGCAAGAGGTCAGACTCAGACGCCGGGCCAGACCCATACTCGTGCTGCTGCAAAGCCTAATTCAGAGCCAGACACGAAAATTGTAACCAATGATTCATCACCGCCGGCATCATCATCACCACCACCTCCTCCACCTCAACCTCCAGCTCCGGCAGGTCCTTCTCAGTCAAATAATGTCATCTCGTCGACCGTGCAGACGCAAAATCCAGAAAACCCCCCACAAGTCACGGAGGAACCACCTCAGGCCACTACTGCTCTAAACGGGAGCAGCTGCAGCAGCAGCAGTACCAGCTCATCAAGCAATAGCGGTACCAGTAGTAGTGTATTTGCAAGTTTGTTTGCTTCTTCAACGGCATCTGGAAACCTACAATCTCCTCAAGCATCTGTATTTACTGAGCTAATTAGAGCCAGGGCACGTCAAGATCGTCCAGCAGACCTCACAGGTCCTTCATCTTCCGAGCCCATTTCTCTCTGCCTCTCCACCAATCAGGGGTCATCAATTTTTGGAACAGGAGGTCAAGAGCGTCGGCAGTATGCCCCACCACCGCAGCCAGCAATGTCTGCGACTGCTCTGCTACAAAAAGCTGCTCAAATGGGTGCAGCTTCTACAAATGCCTCGTTGCTTCGCGGGCTTGGTATAGTGTCATCTTCAACTTCATCTTCTTCGGGCCAGCAAGATAACTTACAATGGGGTCAGCGACAAATAGAGCCAGAGAATGCCTCAGTTCCTGCAGGGCTTGGACTTGGGCTTCCCTGTGATGGTAGCTCTGGACTAAAGGAATTAATGATGGGATCTGCTTCCATGTTTGGTCCAAAGCAAACAACCCTTGATTTTCTTGGATTGGGGATGGCTGCTGGTGGCACCCCAAGCGGAGGCTTATCGGCACTTATCACATCAATAGGTGGTGGTGGTCTGGATGTTTCTGCTGCCGCGGCATCTTTTGGCAGTGGAGAGTTCTCTGGGAAAGATATTGGAAGGAGCTCGTGA 1563 0.4958 MPVDLDNSSTASGEASVSSSGNQTVPQKSTAKKKRNLPGMPDPDAEVIALSPKALLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARGQTQTPGQTHTRAAAKPNSEPDTKIVTNDSSPPASSSPPPPPPQPPAPAGPSQSNNVISSTVQTQNPENPPQVTEEPPQATTALNGSSCSSSSTSSSSNSGTSSSVFASLFASSTASGNLQSPQASVFTELIRARARQDRPADLTGPSSSEPISLCLSTNQGSSIFGTGGQERRQYAPPPQPAMSATALLQKAAQMGAASTNASLLRGLGIVSSSTSSSSGQQDNLQWGQRQIEPENASVPAGLGLGLPCDGSSGLKELMMGSASMFGPKQTTLDFLGLGMAAGGTPSGGLSALITSIGGGGLDVSAAAASFGSGEFSGKDIGRSS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00614 520 Gene3D Classic Zinc Finger 43 107 - -
Bach4g00614 520 FunFam protein indeterminate-domain 5, chloroplastic-like 115 194 - -
Bach4g00614 520 MobiDBLite consensus disorder prediction 332 376 - -
Bach4g00614 520 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Bach4g00614 520 Gene3D Classic Zinc Finger 115 194 - -
Bach4g00614 520 MobiDBLite consensus disorder prediction 227 244 - -
Bach4g00614 520 FunFam protein indeterminate-domain 12-like 40 108 - -
Bach4g00614 520 MobiDBLite consensus disorder prediction 337 364 - -
Bach4g00614 520 MobiDBLite consensus disorder prediction 245 298 - -
Bach4g00614 520 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 478 IPR031140 -
Bach4g00614 520 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Bach4g00614 520 SMART c2h2final6 61 83 IPR013087 -
Bach4g00614 520 SMART c2h2final6 102 132 IPR013087 -
Bach4g00614 520 SMART c2h2final6 137 157 IPR013087 -
Bach4g00614 520 MobiDBLite consensus disorder prediction 1 31 - -
Bach4g00614 520 MobiDBLite consensus disorder prediction 191 298 - -
Bach4g00614 520 MobiDBLite consensus disorder prediction 1 45 - -
Bach4g00614 520 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Bach4g00614 520 MobiDBLite consensus disorder prediction 192 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00614 Bach-Chr4 4121504 4123771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00614 1 520 IDZ Gene Family AT5G66730 60.521 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach4g00614 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00614 K25869 - tcc:18610967 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00614 4 4121504 4123771 Bach10g00530 10 3785985 3789309 BWGD
Bach4g00614 4 4121504 4123771 Bach4g00614 4 4121504 4123771 ECH
Bach10g00530 10 3785985 3789309 Bach4g00614 4 4121504 4123771 ECH