LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00611	CTTCTGAAATTCTCAGCCGTTGATATCTTTGTAAAAGAAAAAAAAAAAAAAAAAAGGTACCGTAGAAAGGAACAAGTAGCGGCCCCTAAAAAGCATAGTCATTAGGACTTCCACCTCACCGTTTTCCTCCGTTTCTCAACGCCATGAAACCAGGTGATCTTAGGACTTTCGTCTGTATCAGCACTTGATCTGATCGTAGGTCTTTCGGGTTGGTAGTACTGAAAGAGGCAGTTTTTTCTGAACTGATCTGGATGGGAACAGGGGAAGAGAACACAACTAAATCTTCTAAGCCATCTTCTTCAGCTCAGGAGATACCAGCAGCACCTTCATATACCGATTGGTCAAACTCTATGCAGGCTTATTATGGTCCTGGAGCCGCTCCACCTCCATTTTATGCCTCGACTGTTGCTTCGCCTACTCCTCACCCTTATTTATGGGGGGGCCAGCATCCTCTAATTCCACCATATGGGACTCCAGTTCCATATCCAGCTATATATCCTCCAGGGGGTGTCTATGCTCATCCAAGCATGGCCACGACTCAAAGCTCTGTACCACCAAATACAGAGTTGGATGGCAAGGGACCTGAAGGAAAAGATCGTGCGTCAGCCAAAAAATCAAAGGGAGCTTCTGCTAATGCAGGTCCCAAAGCAGGAGATAGTGGAAAGGCGGGCTCTGGGTCAGGAAATGAGGGCAACTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCATCAGACGCTAGTGATGAGAATACTAACCAACAGGAATCAGCTGCAAACAAGAAGGGAAGTTTTGACCAGATGCTTGTTGATGGAGCCAATGCACAAAACAATTCTTCTGTGCCTGCGACTAATCTGAATATCGGAATGGACTTGTGGAATGCAACCCCAGCAGGTGCTGAAGCAGCAAAAATGAGACACAATCAATCTGGCGCCTCTGCAGTTGCTCCTTCAATGGATGAACGTGAATTGAAAAGACAGAAAAGGAAACAATCTAATAGGGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGCGAAGAGTTGCAAAAGAGGGTGGAGACGTTGGGGAGCGAGAATCGAACTTTAAGAGACGAGTTACAGAGGCTTTCTGAAGAATGTGCGAAACTGACATCTGAAAATAGTTCTATCAAGGAAGACTTGGAACGGTTATGTGGGCCAGAAGCAGTTTCTAACCTTGAATAG	1208	0.4603	MGTGEENTTKSSKPSSSAQEIPAAPSYTDWSNSMQAYYGPGAAPPPFYASTVASPTPHPYLWGGQHPLIPPYGTPVPYPAIYPPGGVYAHPSMATTQSSVPPNTELDGKGPEGKDRASAKKSKGASANAGPKAGDSGKAGSGSGNEGNSQSAESGSEGSSDASDENTNQQESAANKKGSFDQMLVDGANAQNNSSVPATNLNIGMDLWNATPAGAEAAKMRHNQSGASAVAPSMDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGSENRTLRDELQRLSEECAKLTSENSSIKEDLERLCGPEAVSNLE	318

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00611	318	SMART	brlzneu	236	300	IPR004827	GO:0003700\|GO:0006355
	Bach4g00611	318	MobiDBLite	consensus disorder prediction	141	177	-	-
	Bach4g00611	318	FunFam	BZIP transcription factor	238	289	-	-
	Bach4g00611	318	MobiDBLite	consensus disorder prediction	70	84	-	-
	Bach4g00611	318	Pfam	G-box binding protein MFMR	1	93	IPR012900	-
	Bach4g00611	318	MobiDBLite	consensus disorder prediction	214	261	-	-
	Bach4g00611	318	Coils	Coil	249	304	-	-
	Bach4g00611	318	MobiDBLite	consensus disorder prediction	1	26	-	-
	Bach4g00611	318	CDD	bZIP_plant_GBF1	241	292	IPR045314	GO:0003700\|GO:0006355
	Bach4g00611	318	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	1	314	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Bach4g00611	318	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	243	258	IPR004827	GO:0003700\|GO:0006355
	Bach4g00611	318	Gene3D	-	239	293	-	-
	Bach4g00611	318	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	238	301	IPR004827	GO:0003700\|GO:0006355
	Bach4g00611	318	Pfam	bZIP transcription factor	236	298	IPR004827	GO:0003700\|GO:0006355
	Bach4g00611	318	MobiDBLite	consensus disorder prediction	45	200	-	-
	Bach4g00611	318	MobiDBLite	consensus disorder prediction	185	200	-	-
	Bach4g00611	318	SUPERFAMILY	Leucine zipper domain	239	295	IPR046347	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00611	Bach-Chr4	4095147	4099821	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach4g00611	1	318	bZIP Transcription Factor Family	AT4G36730	57.143	2.51e-111	324

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Bach4g00611		MFMR	8.2e-32	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00611	K09060		-	gmx:778191	455.677