Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00610 ATGAGCCACCGTCATATTGATGATGATATGGTATTCATCTCTCAACTATATCCTGGTTCATACACAGAAATGAACACACAACAAGGAGAGACAAAGTCAAGACGACGTCGTAATAAGAAGAAAGGAGCACAAAATGGATCGCTGGGAGCCAGGAAGAGGAAGCTGAATGGAGAGCAAGTTAAACTTCTTGAATTACACTTTGGGAGTGAGCATAAATTAGAGTCTGAAAGAAAGGACCGGCTGGCGTCTGAACTGGGTTTGGATCCTCGGCAAGTGGCCGTTTGGTTCCAAAACCGGAGGGCCCGGTGGAAGAACAAGAAGTTGGAGGAAGAGTACTCCAACCTTAAAAAACTCCACGAAACCAGCATCGTTGAGAACTGCCACCTTCAAAACGAGAACGATCATCCGCAGGTGTTTAAGCTCAAGGAGAAGCTTTCAGAGGCTGAGAAAGAGAATCAACGACTACGAGAGAGTGGGAGCAGCAGTCCATCATCTTCACAAACACAGTCAATGGGAGCTATGGAACCCCCATTTTTGGGAGAGTTTGGAGAAGGATATGACTATGATATGTTCTCCATGCCAGAGACCCATTACATCAACGGCATGGAATGGATAAATCTCTACGTGTGA 630 0.4571 MSHRHIDDDMVFISQLYPGSYTEMNTQQGETKSRRRRNKKKGAQNGSLGARKRKLNGEQVKLLELHFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKLHETSIVENCHLQNENDHPQVFKLKEKLSEAEKENQRLRESGSSSPSSSQTQSMGAMEPPFLGEFGEGYDYDMFSMPETHYINGMEWINLYV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00610 209 FunFam homeobox-leucine zipper protein ATHB-40 45 114 - -
Bach4g00610 209 ProSitePatterns 'Homeobox' domain signature. 81 104 IPR017970 GO:0000981|GO:0006355
Bach4g00610 209 MobiDBLite consensus disorder prediction 147 176 - -
Bach4g00610 209 SUPERFAMILY Homeodomain-like 52 114 IPR009057 -
Bach4g00610 209 MobiDBLite consensus disorder prediction 22 53 - -
Bach4g00610 209 CDD homeodomain 51 107 IPR001356 GO:0003677
Bach4g00610 209 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Bach4g00610 209 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 28 166 IPR045224 GO:0003700
Bach4g00610 209 MobiDBLite consensus disorder prediction 157 173 - -
Bach4g00610 209 Gene3D - 43 114 - -
Bach4g00610 209 PRINTS Lambda-repressor HTH signature 86 102 IPR000047 GO:0003677
Bach4g00610 209 PRINTS Lambda-repressor HTH signature 77 86 IPR000047 GO:0003677
Bach4g00610 209 Coils Coil 98 125 - -
Bach4g00610 209 SMART HOX_1 49 110 IPR001356 GO:0003677
Bach4g00610 209 Coils Coil 138 158 - -
Bach4g00610 209 Pfam Homeodomain 53 105 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00610 Bach-Chr4 4085137 4086902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00610 1 209 Homeobox Transcription Factor Family AT4G36740 51.802 5.34e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bach4g00610 Homeodomain 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00610 K09338 - qsa:O6P43_024730 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00610 4 4085137 4086902 Bach10g00524 10 3748222 3749911 BWGD
Bach4g00610 4 4085137 4086902 Bach4g00610 4 4085137 4086902 ECH