Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00596 ATGCTTGGTCAGAGGTCTGTCTTTCGGAAACGAATTTCTGCAGTTCTGCTCGAGATCACCCTTCTTTCAACAAAATCAGGCATTTGTGTGGGAATGGCTAGTGGGTCCGGGGAATCAACGAGCGCTCCACCACAAAGCCCAAGTTACTCATCAAATGGTTCTAACGATACTGGTGATTTTGAATGCAATATCTGCTTCGAATTAGCTCAAGACCCAGTTATCACACTGTGTGGTCATCTCTTCTGCTGGCCCTGCCTCTATAGGTGGCTTCGTCATCACTCACATTCTCAAGAATGCCCTGTTTGTAAGGCTTTGATACAAGAGGAAAAATTAGTTCCACTGTATGGGAGGGGCAAATCACAGAGTGATCCAAGGACCAAGTCATATCCTGGAATGGACATTCCCCACCGTCCTACAGCTCAGAGACCTGAAACAGCACCTCCTCCTCAACCCAATCCATTTGGGAATCATGGTTTTGGCTTTATGGGGGGATTCATACCCACGGCAACTGCCAGGATTGGAAACTTGACACTTTCTACTGCTTTTGGTGGTTTTATCCCATCTCTGCTTAACATTCAGTTCCATGGCTTTCAAGATGCCACTGTCTATGGAACTACTTCTGGTTATCCCGTTGGATTCAACTCATTTTATGGATGGAATGTACATGGTTATCCTCAACCAACTGGTCATAGGCGGCGGCATGATGACAATGTTTTGAAGAATCTGCTTATATTGATAGGTGTACTCGTACTCCTTGCACTCATTTTTGGGTGGTAA 777 0.4543 MLGQRSVFRKRISAVLLEITLLSTKSGICVGMASGSGESTSAPPQSPSYSSNGSNDTGDFECNICFELAQDPVITLCGHLFCWPCLYRWLRHHSHSQECPVCKALIQEEKLVPLYGRGKSQSDPRTKSYPGMDIPHRPTAQRPETAPPPQPNPFGNHGFGFMGGFIPTATARIGNLTLSTAFGGFIPSLLNIQFHGFQDATVYGTTSGYPVGFNSFYGWNVHGYPQPTGHRRRHDDNVLKNLLILIGVLVLLALIFGW 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00596 258 ProSitePatterns Zinc finger RING-type signature. 77 86 IPR017907 -
Bach4g00596 258 SUPERFAMILY RING/U-box 58 115 - -
Bach4g00596 258 ProSiteProfiles Zinc finger RING-type profile. 62 103 IPR001841 -
Bach4g00596 258 SMART ring_2 62 102 IPR001841 -
Bach4g00596 258 CDD RING-HC_AtRMA-like 60 104 - -
Bach4g00596 258 MobiDBLite consensus disorder prediction 116 153 - -
Bach4g00596 258 Pfam Zinc finger, C3HC4 type (RING finger) 61 102 - -
Bach4g00596 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 123 IPR013083 -
Bach4g00596 258 FunFam E3 ubiquitin-protein ligase RNF185 isoform X2 46 116 - -
Bach4g00596 258 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 45 252 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00596 Bach-Chr4 4010226 4012534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00596 51 256 C3H Transcription Factor Family AT2G23780 58.879 4.53e-85 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00596 K10666 - mnt:21392517 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00596 4 4010226 4012534 Bach4g00596 4 4010226 4012534 ECH
Bach12g00189 12 1310513 1311199 Bach4g00596 4 4010226 4012534 ECH