Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00588 TGTAACAAGACGAACATTATTGAATCAAGAGAGGGGTACCCGAGCCTTACCTTCAAAACAATTGATCTATTTGCTCAGGGGCCACAACTCGTTGCCAGAAACACAAAATCACTAAGGCAAGAGGGTTTTGCAGCAATATGGACCGAGCGGAATTAAGCGCTGAACAGGTGCTGACGAGGGATATCCCATGGGAGACGTACATGACCACTAAACTGATCTCAGGCACAAGCCTTCAGCTCTTGAGGCGTTATGATCATAGATCAGAAAGTCACAGAGCACAGTTGCTGGATGATGATGGTCCAGCTTATGTACGCGTATTTGTTCGTGTCCTGCGTGATATTTTTAAAGAAGAGACTGTAGAATATGTTCTCGCATTAATAGATGAAATGCTTACAGCAAACCCCAAAAGAGCTAGACTGTTTCATGACAGGTTGCTATGGAAAGGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTCAGTGCCAGGCCAAGAAATCAGAATGGCATCATTTCTAATGGAGAAGCATCCAACTCAAAGAAACCGTTTACTACTATTGATGATGTTTTGAAAGGATTGGTAGAATGGCTTTGTGCACAGCTGAAGAAGCCTTCTCATCCTAGTCGTGGTGTCCCAACTGCTATCAATTGCTTAGCAACTCTACTTAAGGAACCTGTGGTCAGGTCGTCCTTTGTTGAAGCAGATGGGGTCAAGCTGCTTGTACCTTTGATTTCTCCAGCATCCACACAACAATCTATGCAGTTGCTTTATGAAACGTGTCTTTGCATTTGGCTCTTGTCCTACTATGAACCAGCAGTAGAATACTTGGCTACTTCTAGAACCCTTCCGCGACTTATTGAAGTTGTTAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGCCTTGACCCTTAAGAACTTACTATCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTTCAACTGCCACAAGTTGTTCAGAGTTTGAAGGCACAAGCATGGAGTGATGAGGACTTATTGGAGGCACTGAATTACCTGGAAGAAGGGCTTAAGGATAACATTAAGAAACTAAGTTCTTTTGATAAGTATAAGCAAGAAGTTCTACTTGGCCGTCTGGATTGGTCTCCCATGCACAAAGATCCTATATTTTGGCGGGAAAACATCACCAACTTTGAAGAGAATGACTTCCAGATTCTAAGGGTCCTAATAACAATTTTGGACACGTCCAGTGATCCAAGGACTCTGGCTGTTGCTTGCTTTGATCTTTCACAGTTCATCCAGTACCATTCTGCTGGGAGGATCATCGTGAATGATCTCAAAGCCAAGGAACGAGCGATGAAACTAATGAATCATGAGAACGCTGAGGTAACAAAGAATGCGCTGCTCTGCATCCAACGGCTTTTATTAGGTGCAAAGTACGCAAGCTTCTTGCAGGCTTAGTTCTATTTCCGTCGGTTGGCATGATGTATGCATTTAATTCCATCCACCGTGGGCTCTCTTCCGTACAAGGTTTATTCGTTCATTGCTTATGAGTAATTTATTGTCTATGGCCATAAGAGTTTCAGTCTCGAATCAGTAGAAGAAATTTTACATGAGAAATAAGTATCCTTGGAATTCAACTGAAAAATAAATCAAGTTTTGTAACTGTATACTCGAAGAAATTTGTGCATGTAGATTATTTCAGTTTGTTTGAAATGAAATATTAT 1723 0.4132 MDRAELSAEQVLTRDIPWETYMTTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRVFVRVLRDIFKEETVEYVLALIDEMLTANPKRARLFHDRLLWKGNWFIQEKSCKILALIVSARPRNQNGIISNGEASNSKKPFTTIDDVLKGLVEWLCAQLKKPSHPSRGVPTAINCLATLLKEPVVRSSFVEADGVKLLVPLISPASTQQSMQLLYETCLCIWLLSYYEPAVEYLATSRTLPRLIEVVKSSTKEKVVRVVALTLKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSFDKYKQEVLLGRLDWSPMHKDPIFWRENITNFEENDFQILRVLITILDTSSDPRTLAVACFDLSQFIQYHSAGRIIVNDLKAKERAMKLMNHENAEVTKNALLCIQRLLLGAKYASFLQA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00588 439 FunFam V-type proton ATPase subunit H 330 431 - -
Bach4g00588 439 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 438 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bach4g00588 439 Coils Coil 399 419 - -
Bach4g00588 439 Gene3D - 5 318 IPR011989 -
Bach4g00588 439 PIRSF V-ATP_synth_H 2 438 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bach4g00588 439 SMART arm_5 389 429 IPR000225 GO:0005515
Bach4g00588 439 SMART arm_5 228 269 IPR000225 GO:0005515
Bach4g00588 439 SMART arm_5 182 227 IPR000225 GO:0005515
Bach4g00588 439 SUPERFAMILY ARM repeat 8 429 IPR016024 -
Bach4g00588 439 Pfam V-ATPase subunit H 316 429 IPR011987 GO:0000221|GO:1902600
Bach4g00588 439 Pfam V-ATPase subunit H 5 310 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bach4g00588 439 Gene3D - 331 431 IPR038497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00588 Bach-Chr4 3973710 3978367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00588 1 439 Primary Pumps ATPases(2) AT3G42050 78.982 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00588 K02144 - gmx:100788723 790.801