Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00587 TTTGAATTGAATTTAGTTGGAGTCTGATTCTCTTTCTCCCTCTACCGGATCCATCTTTTTGGTGGTCTTAAGGAAAGGGAGATAAAATAGGTATCACTTCCTGAAAAGATTCCGCTGTAGCCGTTTTATCCCTTTTGGTCTGGATTTGCGCAGGATACAAGTACTCCTCTTTTCACTCTTTCCTCTCTACAGCTATTATTCTATTCACCATTCAGGAATCGGAGAGAGGGAGAAAGAGAAAGAATATCTATCAATTACTGTATATTGATTATATTCTAATAATCCGCGGTTTACTGGTATTACTACGAACTAATGGGAATTGGAAACTCTACTTGAGCTGAGATTCACCAGATTCCACTGTCTCTGCAGATTCTTTATCTCTTTCCGGTAAAAGTTATCCAACTCACAGGCAAATAATATTCATATTATGGGTTGGTTTACCAAGTTGCTCAAGAGCTCAAACCATAAAATTTATGGAGGACAATATCATGGGAAATATGGAGATGACAGAATTTGGGATAATCATCACACTTCTACGGATGAATTGTCAGATATTGAGAAAGAAGAGATTGATCGCGCAATTGCACTCTCTCTAGCGGAGGAGGATCAGAAAGGGAAAAAAGTTATTGAGGAAGAATCTCAGTCAGAAGATGATGAGCTTTGCAAAATTGAAGAGGAGGAAGATGAATATCTTCCTAAAGTTAGACAGGAGGAAGATGAACATCTCGCTCAAGATCAACTTGAAGAAGACGAACAGCTTGCCAGGGCACTTCAAGAAAGTTTAAACATGGGCTCTCCCCCTCGATATGACTCTGGCTCTATATTTCAACCTGATTCACTGCACTTTCCACCTGGATACAGGATCTGTGCTGGATGCAACACTGAGATTGGCCATGGAAGATTTTTAAGTTGCATGGAAGCAGTCTGGCATCCAGAATGTTTCCGCTGCCATATCTGTAATCTGCCAATCACTGATTATGAGTTTTCAATGTCTGGAAATCGTCCTTACCATAAATCTTGCTATAGGGAGCAGCATCACCCAAGATGTGATGTTTGCAAGAACTTTATCCCTACAAATTCAGCTGGCCTCATTGAGTATAGAGCACATCCTTTCTGGCTACAGAAATACTGTCCATCGCATGAGCGTGATGGCACTCCTCGATGTTGTAGCTGTGAACGAATGGAGCCAAGGGACACAAAATATCTTTTGCTTGATGATGGTAGAAAGCTATGTCTAGAGTGTCTTGACTCTTCGATTATGGATACTCATGAATGCCAGCCTCTTTACTTTGAAATACAAGAATTTTATGAAGGATTAAATATGAAGGTGGAGCAGCAGGTTCCCATGCTTTTGGTTGAGAGACAAGCACTGAATGAAGCCATGGAAGGAGAAAAGAATGGTCATCACCACTTACCAGAAACTAGAGGACTCTGCTTGTCAGAAGAGCAGACGGTCACCACTATTTTAAGGAGGCCGAAGATAGGAGCAGGGTACCGGGTCATAGACATGATAACTGAGCCATATAGACTGATCCGTCGGTGTGAAGTGACTGCCATTCTTGTTTTGTATGGCCTTCCTAGGTTATTAACAGGATCAATCTTGGCTCATGAGATGATGCATGCATGGCTCAGGCTTAAAGGTTATCCCAATCTGAGTCCTGAAGTTGAAGAAGGAATTTGCCAAGTCTTGGCTCATATGTGGTTAGATGCAGAGATGTATTCTGGATCTGGTAATGATGGCGCATCATCATCATCTTCCTCGTCCTCATCTTCGCCTTCCTCCTCTTCCACGTCATCAAAGAAGGGTAAACGATCTGACTTTGAGAAGAAACTCGGTGAGTTTTTTAAACACCAGATCGAGTCAGATACCTCATCAGCATATGGAGATGGATTCAGATTGGGTAACCAGGCCGTGCTCAAGTATGGACTCAGGAGGACCCTCGATCATATTCAGATGACAGGAAGTTTTCCATATTGAATCCATCATAGAATTTTCTTACCCTTATATATCAATCAATACCTTAGCCTTTTCAAATAAATTTTATATATAGGATCCAAAAGGTTTCAAAATCAAATAATTTAACATCTTTAAACAAAATAAGCAACGGAAATCTTCTTAGAGTGCTCTACTTGTAATTTACTCTTGGTACCACATCTTTATATAAACCGCATAATGCTTTTCAGCTGTTTCTTTTTTTTAAAAGAGCTGGAGCTGGGATGGTGAGAATTTT 2231 0.4052 MGWFTKLLKSSNHKIYGGQYHGKYGDDRIWDNHHTSTDELSDIEKEEIDRAIALSLAEEDQKGKKVIEEESQSEDDELCKIEEEEDEYLPKVRQEEDEHLAQDQLEEDEQLARALQESLNMGSPPRYDSGSIFQPDSLHFPPGYRICAGCNTEIGHGRFLSCMEAVWHPECFRCHICNLPITDYEFSMSGNRPYHKSCYREQHHPRCDVCKNFIPTNSAGLIEYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLLLDDGRKLCLECLDSSIMDTHECQPLYFEIQEFYEGLNMKVEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRRPKIGAGYRVIDMITEPYRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYPNLSPEVEEGICQVLAHMWLDAEMYSGSGNDGASSSSSSSSSSPSSSSTSSKKGKRSDFEKKLGEFFKHQIESDTSSAYGDGFRLGNQAVLKYGLRRTLDHIQMTGSFPY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00587 516 Pfam Protein DA1 296 511 IPR022087 -
Bach4g00587 516 ProSiteProfiles LIM domain profile. 145 205 IPR001781 -
Bach4g00587 516 SMART uim 106 125 IPR003903 -
Bach4g00587 516 SMART uim 43 62 IPR003903 -
Bach4g00587 516 PANTHER PROTEIN DA1-RELATED 2 3 516 IPR045218 -
Bach4g00587 516 MobiDBLite consensus disorder prediction 436 458 - -
Bach4g00587 516 FunFam Protein DA1-related 1 141 200 - -
Bach4g00587 516 ProSitePatterns LIM zinc-binding domain signature. 147 181 IPR001781 -
Bach4g00587 516 MobiDBLite consensus disorder prediction 436 462 - -
Bach4g00587 516 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 140 172 - -
Bach4g00587 516 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 106 125 IPR003903 -
Bach4g00587 516 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 173 228 - -
Bach4g00587 516 Coils Coil 67 87 - -
Bach4g00587 516 Gene3D Cysteine Rich Protein 141 205 - -
Bach4g00587 516 SMART lim_4 146 198 IPR001781 -
Bach4g00587 516 CDD LIM_DA1 147 199 - -
Bach4g00587 516 Pfam LIM domain 147 202 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00587 Bach-Chr4 3966733 3972703 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach4g00587 DA1-like 1.2e-106 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00587 - - gmx:100817969 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00587 4 3966733 3972703 Bach10g00511 10 3679799 3683554 BWGD
Bach4g00587 4 3966733 3972703 Bach4g00587 4 3966733 3972703 ECH
Bach10g00511 10 3679799 3683554 Bach4g00587 4 3966733 3972703 ECH