Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00547 ATGTCATCATCGAATTCTCCCTGCGCTGCTTGTAAGTTTCTGAGGAGGAAATGCACGCAAGAATGCGTGTTCGCACCGTACTTTCCACCGGACAATCCTCAGCGCTTTGCTTACGTCCATAAGGTTTTTGGCGCAAGCAATGTTGCTAAGCTTCTCAACGAGCTCAACGCGGCACAACGTGACGACGCAGTTAAGTCTTTGGCTTATGAAGCCGAGGCCCGCCTCCGGGATCCAGTCTATGGTTGTGTGGGTCGCATCTCTCTTCTTCAGCACAGGCTCAGGCAGATCCAAGGTGAGCTCAACAATGCCAAGAAAGAGCTATCAACTTATATTGGACCCCATGCCTTGCAGACCGTCACTCCCATTTTACCATCTTCTGGAGTCATGCCCCAACAGCACCCGGCTAACTCATATACCTCTGCCGTCTATCCTTACAACATGCCACCACCACCGGCACCGGCTATGTCGGGTATTCCGACGCATAGTGGCCAATTGGTGATTCGTGAGCCCCAGCAACAGCAGCAGCAGCATCAGATCTTGGAAGCTCAGCAACTGGCTGTGGCTGTGGCGGCAAGAGAGCAGCAAGATATGTTCCGGACTTACGAACAACAGCAGCAGCAGCAGGATTTCCTTAGATTTAATAGTGGATTCATTGTGGGTGGTAGTGGGTTTAACCAAATGTCTACAGGTGCCGCTCCCGCTGATATGCCTCCATCATTGGCTCTGGGCACATTCGATAACCCCTACCACATTCAAACTCAGCAGGCAGAACAACATCACCCTCTGGCTCATCAGCTTCAGGCACAGCTAATGCTATCACCACAGCATCCTCAAGCTCAGCAACAAACGCAGCAGTCACAGCAACCACAACAGTCCGAAAGCGAGGAGGGCAGGAGTGTGGGTCCTTCTTGTTGA 915 0.5202 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGRISLLQHRLRQIQGELNNAKKELSTYIGPHALQTVTPILPSSGVMPQQHPANSYTSAVYPYNMPPPPAPAMSGIPTHSGQLVIREPQQQQQQHQILEAQQLAVAVAAREQQDMFRTYEQQQQQQDFLRFNSGFIVGGSGFNQMSTGAAPADMPPSLALGTFDNPYHIQTQQAEQHHPLAHQLQAQLMLSPQHPQAQQQTQQSQQPQQSESEEGRSVGPSC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00547 304 Coils Coil 86 106 - -
Bach4g00547 304 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Bach4g00547 304 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Bach4g00547 304 MobiDBLite consensus disorder prediction 273 304 - -
Bach4g00547 304 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00547 Bach-Chr4 3712741 3713655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00547 1 231 AS2 family AT5G66870 54.941 1.42e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach4g00547 LOB 3.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00547 - - cave:132186856 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00547 4 3712741 3713655 Bach10g00482 10 3478074 3478997 BWGD
Bach4g00547 4 3712741 3713655 Bach4g00547 4 3712741 3713655 ECH