Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00525 ATGGACTCTTGTTGTTCTACCAGTATTTGTAGTATTCACGGTGGGGAGAGTATCAGAGGAACAGTTAGCTTTAGGGTGCCAGACCAGGAGCAAGAGAACTCCATTATGGTCTCAGCTCTGTGGCGCGTCATCTCATCGGGTGTTAACGATCATCATGAGGGCCCAGAGATGCCATCAAGTTCTCGTGATCATCCTGAAACGTGTCAGGTTTGCGAAATCAATGGGTGTCTTGGTTGCAACTTGTTCTTGCCGGTGAAGGTGAGTAATGATGATGAAAAGCAGGGGCAGAATGTGAAACAGAAGAGGAAGAAAAGAGAGGACAAATACAGAGGGGTGAGGCAGAGGCCGTGGGGCAAGTGGGTCGTGGAGATTCGAGACCCACGACGTGCGACTCGGGTTTGGCTCGGCACCTTTGAGACTGCAGAGCAAGCTGCCAGGGCTTATGACAAAGCTGCCATTAACTTCCATGGCTCCCGAGCTAAGATAAATTTTGAATTCTCTGACTATTCTCAGAAACAAATCACACCAGTGAAGGAACATGTTGAAGAAGCCCAATTCTGTGACAAGCTTGGGGAGGAATCATGA 585 0.4872 MDSCCSTSICSIHGGESIRGTVSFRVPDQEQENSIMVSALWRVISSGVNDHHEGPEMPSSSRDHPETCQVCEINGCLGCNLFLPVKVSNDDEKQGQNVKQKRKKREDKYRGVRQRPWGKWVVEIRDPRRATRVWLGTFETAEQAARAYDKAAINFHGSRAKINFEFSDYSQKQITPVKEHVEEAQFCDKLGEES 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00525 194 ProSiteProfiles AP2/ERF domain profile. 108 165 IPR001471 GO:0003700|GO:0006355
Bach4g00525 194 Gene3D AP2/ERF domain 107 166 IPR036955 GO:0003700|GO:0006355
Bach4g00525 194 CDD AP2 108 165 IPR001471 GO:0003700|GO:0006355
Bach4g00525 194 SMART rav1_2 108 171 IPR001471 GO:0003700|GO:0006355
Bach4g00525 194 SUPERFAMILY DNA-binding domain 108 166 IPR016177 GO:0003677
Bach4g00525 194 PANTHER DNA-BINDING DOMAIN 63 170 IPR044808 GO:0003700|GO:0009873
Bach4g00525 194 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Bach4g00525 194 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Bach4g00525 194 FunFam Ethylene-responsive transcription factor 2 107 166 - -
Bach4g00525 194 Pfam AP2 domain 108 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00525 Bach-Chr4 3534605 3535189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00525 30 177 AP2-EREBP Transcription Factor Family AT4G34410 47.486 6.43e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach4g00525 AP2 9.2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00525 - - lja:Lj0g3v0306799.1 168.318