Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00524 TGTGATCCAATTTCAAAGAGTCGTTCTGGTTGGAACTCATGGATAGTGATCCTCGCAGAAAGCCTTCCGATAGCTTAGTTCATTCTCGCTTCTTCCTTTCTGGCTTTTATTGCTGGGGTTGGGAATTCTTGACAGCTTTGCTCCTCTTTAGTTGTTCCTCCTAGACTTCATTCTCAATACCCCCAATCTTTGCTTAGTTAGGGTTATTCGATTTCTTTTCAATTACAACGGGGGATTTGATTCTCTCTCTCTCTCTATTATTTTTCTCATTTTTACGTTTGGGTTATAGCAGATAAATAAGACAAGGGGTTTTAATCGGGGATAATTAGAGTAGATTTCGGAGTAAGGTGAAGGGCGGATCGGAAAAAAAATGTCACAGCGGTCGATGCCGGCGCCGTTTTTGACGAAGACGTACCAGTTGGTGGATGAACCCGCCACGGACGATGTGATATCGTGGAGCAAAAGCGGCAACACTTTTGTGGTGTGGAAGCATGCGGAATTTGCAAAGGATTTTCTTCCCAATTACTTCAAGCACAACAACTTCTCAAGCTTTGTCCGCCAGCTTAACACTTATGGATTCAGAAAGATTGTTCCTGACAAGTGGGAATTTGCGAACGAGTATTTCAAGCGTGGACAGAAGGAGCTGCTTTCTGAAATCAAACGGCGGAAAACCGTGGGACAAGCATCGGCACAGGTGTCCGGGACGGGAAAATCCGATGGTGGTGGTAACTCTGCATCAAACTCGGGCGGTGATGACATGGGGTCGACGTCTACTTCGTCCCCTGATTCGAAGAATCCGGGATCGGTGGAGACAATAACAACTCAATATGCGGATTTATCAGGTGAAAACGAGAAACTGAAAAAGGATAACGAAATGCTGATCTCGGAGCTGGCGCAAGCCAAGAAGCAGTGCGATGAGCTGATAGCTTTCCTGAAGGATTATCTGAAGCTGGGGCCGGATCAGGTCAATCGGATCCTGCGGCAAGGAAGTAGTGGGTCCAGCCGCGGTGAATTGGTCGGTCCGGTGCCCAGTCTAACTGTAGATGGTGATGATGACGAAAACGCGGTAGGTGATGATATTGAGAAGGAAGGTGGAGAAAGTCTGAAACTTTTTGGGGTTTGGTTGAAAGGGAAGGATGGCGATGGCGAGGAGGAAATCTCCCACAACAAAAGAAGGCGCCAAGATCAAGTCAGCTTCAGTGGGCCTCACCGTCACGCCAAGGAGTTGAAGACGACCCTTGCTCGCTACACAATCCAAAAGGGAATCAAAATTTCTATAAAATAAATAAATAAGAAGTTAACGATCCAAAAGGGAATCAAAATTTCTATAAAATAAATAAATAAGAAGTTATTCTGGGTGGAGGTCTGCATTCCGTAAGGTAAAAGGCCAGATGCGGCCCCCTCATTCTGGACAATATCAAAGTCTTCATTAATGTAATTCTTTTAGTTTTAGATACTTATTATAGCTGGTATATATGTATGGCGCTGTAACTAAAGAATAATCATGGGATTTATTATTATTTATCATTCCAGTGAAC 1538 0.4434 MSQRSMPAPFLTKTYQLVDEPATDDVISWSKSGNTFVVWKHAEFAKDFLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEYFKRGQKELLSEIKRRKTVGQASAQVSGTGKSDGGGNSASNSGGDDMGSTSTSSPDSKNPGSVETITTQYADLSGENEKLKKDNEMLISELAQAKKQCDELIAFLKDYLKLGPDQVNRILRQGSSGSSRGELVGPVPSLTVDGDDDENAVGDDIEKEGGESLKLFGVWLKGKDGDGEEEISHNKRRRQDQVSFSGPHRHAKELKTTLARYTIQKGIKISIK 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00524 304 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00524 304 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00524 304 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00524 304 Gene3D - 147 192 - -
Bach4g00524 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 254 IPR027725 -
Bach4g00524 304 MobiDBLite consensus disorder prediction 255 282 - -
Bach4g00524 304 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Bach4g00524 304 FunFam Heat stress transcription factor B-4 2 100 - -
Bach4g00524 304 Coils Coil 146 180 - -
Bach4g00524 304 MobiDBLite consensus disorder prediction 204 230 - -
Bach4g00524 304 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00524 304 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00524 304 Gene3D - 2 101 IPR036388 -
Bach4g00524 304 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00524 304 MobiDBLite consensus disorder prediction 103 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00524 Bach-Chr4 3528602 3531083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00524 2 279 HSF AT4G36990 52.797 6.66e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach4g00524 HSF_DNA-bind 4.8e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00524 K09419 - qsa:O6P43_033819 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00524 4 3528602 3531083 Bach10g00462 10 3257717 3259469 BWGD
Bach4g00524 4 3528602 3531083 Bach4g00524 4 3528602 3531083 ECH