Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00520 CAAGGTCAGTGAGCGCATGATTCAAGAATTCTTTGCACTTTTATCTTTTTTCTTTGAGCTGTAATTCAATCGCAATTCTACTCGAACCCGACAGGTGATTTACATTTGGCATATGATGACGAAAATTGTGTGTGAGAAAGAAGTGTGCTTATTATGTGCAGGGAGCGAGTGTGAGAGATTTAGAGAGAGAGGGGTGAGAACGCTGAGTGCTGAGCTGAGAGATACCCAAAAAGGAGGAGGTGGAGAGGATTTTTCTTGTTTTTTGTTTCTGTTTGTTAGGGATCTCTCCTTCTGCAGCAGTCGGTTCCCTTTGGTTGCCACTTAACAAAGTATCTTATGGAGCAACGAAAGCTTGTGGTTTTGGGTATTCCTTGGGAAGTCGATACTGAGGGTTTGAGAGAATATATGAGCAAATTTGGCGAATTGGAAGATTGTATTGTCATGAAGGAGCGGTCAACTGGCCGGTCTCGTGGTTTTGGATATGTTACATTTGTGTCCGTTGATGATGCTCAGAATGCATTATCAAGTGAACATGTTCTTGGCAACAGGATGCTGGAAGTCAAAGTGGCCACACCAAAGGAGGAGATGAGGGCGCCAGTCAAAAAGGTTACCAGGATTTTTGTGGCTAGAATTCCACCATCTGTAACAGAAGCAACTTTCAGAAGTCATTTTGAGAAATATGGTGATATAACAGATTTGTACATGCCAAAGGATCAAGGCTCAAAAATGCATCGTGGAATTGGTTTCATCACGTATGCAAGTGCAGAATCTGTAGAGAATTTAATGACAGAAACTCATGAACTGGGAGGTTCTACTGTAGTGGTTGATCGAGCAACACCAAAGGAAGATGACTTTAAGCCAATTGGCAGAACGCAACAGGGAGGATATGGTGCATACAATGCTTATATTTCTGCAGCAACTAGATATGCAGCACTTGGTGTTCCGACTTTGTATGACCATCCTGGTTCAATATATGAAAGGGGAGAACCTGCTCATGGAATGGGCAAAAAGATTTTTGTTGGCCGTCTTCCCCCCGAAGCAACAGTTGATGATCTTCGTCAGTATTTTGGCAGATTTGGCCGTATTTTAGATGTTTATGTTCCCAGGGATCCTAAGAGATCAGGCCATAGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTGGCAGATCGTGTCTCCCGGAGGTCTCACGAGATTTGTGGACATCAGGTTGCGATAGATTCAGCCACACCTCTTGATGATGCTGGGCCAAGTAGAAATTTTATGATGAATACAGTAGATTCATTTCCGGGATATGGTGGTCCAATGCGAACATATGGGAGGATGTATGGCAGCCTGGACTTCGATGACTGGGGTTATGGAATTAGCAGTGGGAGACCCGCGAGAGCTGATTGGAGGTATAGGCCATACTGA 1416 0.4371 MEQRKLVVLGIPWEVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFVSVDDAQNALSSEHVLGNRMLEVKVATPKEEMRAPVKKVTRIFVARIPPSVTEATFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITYASAESVENLMTETHELGGSTVVVDRATPKEDDFKPIGRTQQGGYGAYNAYISAATRYAALGVPTLYDHPGSIYERGEPAHGMGKKIFVGRLPPEATVDDLRQYFGRFGRILDVYVPRDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPLDDAGPSRNFMMNTVDSFPGYGGPMRTYGRMYGSLDFDDWGYGISSGRPARADWRYRPY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00520 359 SUPERFAMILY RNA-binding domain, RBD 224 323 IPR035979 GO:0003676
Bach4g00520 359 FunFam heterogeneous nuclear ribonucleoprotein 1 2 83 - -
Bach4g00520 359 FunFam heterogeneous nuclear ribonucleoprotein 1 84 176 - -
Bach4g00520 359 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 92 168 IPR000504 GO:0003723
Bach4g00520 359 SUPERFAMILY RNA-binding domain, RBD 89 187 IPR035979 GO:0003676
Bach4g00520 359 SMART rrm1_1 5 76 IPR000504 GO:0003723
Bach4g00520 359 SMART rrm1_1 225 296 IPR000504 GO:0003723
Bach4g00520 359 SMART rrm1_1 93 164 IPR000504 GO:0003723
Bach4g00520 359 FunFam RNA-binding family protein isoform 1 221 304 - -
Bach4g00520 359 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 65 IPR000504 GO:0003723
Bach4g00520 359 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 226 280 IPR000504 GO:0003723
Bach4g00520 359 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 94 151 IPR000504 GO:0003723
Bach4g00520 359 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 80 IPR000504 GO:0003723
Bach4g00520 359 Gene3D - 84 194 IPR012677 -
Bach4g00520 359 Gene3D - 222 304 IPR012677 -
Bach4g00520 359 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 223 331 - -
Bach4g00520 359 SUPERFAMILY RNA-binding domain, RBD 3 85 IPR035979 GO:0003676
Bach4g00520 359 Gene3D - 1 83 IPR012677 -
Bach4g00520 359 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 224 300 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00520 Bach-Chr4 3490407 3494843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00520 5 293 Eukaryotic Initiation Factors Gene Family AT2G23350 26.351 6.86e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00520 K14411 - qsa:O6P43_024629 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00520 4 3490407 3494843 Bach4g00520 4 3490407 3494843 ECH