Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00518 ATGGATGGGGACATAGTGAAAACTTCTTCAGCAGGGGACAGCGGCATGGACATGATGGCAATGATGATGCAGATGGAAAAGTTCCCTGAATTCTGTGAACCTTTTTTTAACGCTCCCACTTACCCGGAAACCGATTTCTCGGGTAATGGAAGTGGAAGTTCCACCAGCATTGCTACCAATCTGCCAATATTCCCACACCCAACTTCGATTAACCCTCCAATACCTTGCTCTACTAATTTCGTTAACAATCCGATTCAGCAGCCTACAACACCTCCCCTTGCACCCATTGAGGTTCCATTCAGACTCAAGAATCCTAACACTTCGTTTCCCTACCCATCATCATCATCAGAGAAGAGAAATTCTGTGGCAGCCATGAGAGAAATGATTTTCCGAATAGCAGTGATGCAACCGATTCATATTGACCAAGAATCTATTAAGCCACCAAAGCGACGAAACGTGAAGATTTCAAAGGATCCACAGAGTGTAGCAGCGAGACACAGAAGAGAAAGGATAAGTGAGAGGATAAGGATTCTGCAGAGACTAGTTCCTGGTGGAACCAAAATGGACACGGCTTCCATGTTAGACGAAGCAATACATTACGTGAAGTTCTTAAAGAAACAGGTGCAGACGCTGGAACAAGCAGGGGCTAGTAGGCCCATGAGTGTTGGTTACCCAGCGATGATGACGTCCAATGTTAGCGCCAACATGAATTATTCTGCTTTAGTCAAGGGCTTCCAACCTTGTCATCAAATGATGGGTTCGATGCAAATGCTCAGCTGA 780 0.4538 MDGDIVKTSSAGDSGMDMMAMMMQMEKFPEFCEPFFNAPTYPETDFSGNGSGSSTSIATNLPIFPHPTSINPPIPCSTNFVNNPIQQPTTPPLAPIEVPFRLKNPNTSFPYPSSSSEKRNSVAAMREMIFRIAVMQPIHIDQESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPMSVGYPAMMTSNVSANMNYSALVKGFQPCHQMMGSMQMLS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00518 259 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 9 257 IPR045843 GO:0003700|GO:0006355
Bach4g00518 259 Gene3D - 154 221 IPR036638 GO:0046983
Bach4g00518 259 FunFam BHLH transcription factor 158 221 - -
Bach4g00518 259 CDD bHLH_AtIND_like 156 212 - -
Bach4g00518 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Bach4g00518 259 Coils Coil 194 214 - -
Bach4g00518 259 SMART finulus 161 210 IPR011598 GO:0046983
Bach4g00518 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 217 IPR036638 GO:0046983
Bach4g00518 259 Pfam Helix-loop-helix DNA-binding domain 165 204 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00518 Bach-Chr4 3477232 3478011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00518 13 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 56.436 5.21e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g00518 HLH 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00518 - - qsa:O6P43_033826 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00518 4 3477232 3478011 Bach4g00518 4 3477232 3478011 ECH