LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00514	TCTCACTCACATACACACTTACGCACACTCTAGGCTCTTCTCTATGAGACTACATGACTATCCTCTGATTATTTGTTTTCCAATTTTCATGTTGCGAGCTTCAAGTTGCTTGCTTTTTGGTATTTGGTGAATAAATAAACTAAATTGATGATATCAGAGTGCGATGCCTGATTATACAACTGGGACAATGAATGACCAGCTCTCAAAGCCCACCTCAATCTTCGGTCTCCGCTTGTGGGTTGTTGTAGGTGTATGTGTTGGATCTGCAATTGTACTCCTTCTCTTCCTCATCTCTATCTGGCTCGCTTCCAAGCGCTCCAAGAGCAAGCCCTCTCAAAGACCCTCAATCCCAGTTGTCTCCAAAGAGATCCAAGAGATTAGAGTAGAGCAACCCCATACCCAGAACTATCATCACCACAATTCCAAGCCAAATGGAACTCACATCCAAGCCGAACCCTTTCCTGAACCAGACCCAGTTCCAGGAATTGAACGGCAAGCTTTACTACCAACATCAGAAGAAGAGAGCCCACTGGGGTACAACAGAATTCAATTTGAAATTGGGAAAAATCATAGAATCTCCTACCCTGAACGTTTTGCTAGGTCTTCTTCACATGGAAGCGGGGAAGCTCGCCCTCCCGATCAAGTTCCTACAGTGATTCCTGAAGTTTCGCATTTGGGTTGGGGTCACTGGTATACTCTGAGGGAGCTTGAGGATTCCACGAATGGGTTTGCCGACGAGAATGTTATTGGTGAAGGCGGCTATGGGATTGTTTATCATGGTATATTGGCAGACAACTCCAACGTCGCTATCAAGAATTTACTAAATAATAGGGGACAAGCTGAGAAAGAGTTCAAGGTTGAAGTGGAAGCTATAGGACGAGTTCGGCATAAGAATTTAGTTAGACTGCTTGGGTATTGTGCAGAAGGAGCTCACAGGATGCTTGTGTATGAGTATGTGAACAATGGGAACTTAGAGCAATGGCTGCATGGGGATGTCGGGCCTTGTAGTCCTCTATCTTGGGAAATCCGAATGAACATTATCCTGGGAACGGCAAGAGGGTTAGCTTATCTCCATGAGGGGCTGGAACCGAAAGTTGTTCATCGCGATATTAAATCAAGCAACATCTTACTTGATAAGCAATATGTAGCTCCTGAATATGCAAGTACTGGCATGTTGAACGAACGAAGTGATGTATATAGTTTTGGAATTCTTATTATGGAAATCATTACCGGCAGGAACCCAGTTGATTATAGTCGGCCTCCAGATGAGGTGAATTTAGTTGATTGGCTTAAGAAGATGGTTAGTAACAGGAATGCAGAGGGAGTATTGGATCCCAAGCTGGTTGAGAAACCTACTTCAAGGGCATTAAAACGAGCTCTTCTTGTAGCATTACGTTCTACAGATCCTAATGCACAAAAGCGGCCTAAAATGGGGCATATCATACACATGCTTGAGGCTGAAGATTCCCCTAACAAAGAGGATCGTAGAGCAAGAAAGGAAGCAGGTCATTCGCCTAATGATAGAACAGGGGAAGAATTGAAGGAGGTGACCGGATCCGGCGATGATTGTACGTTAGAAAGCGGTTTGCATGCCAGTGAGCCAAGATGATAAAAACAAGAAAAGCTCGTGGTGCCCCTCCATCCTTACAATCTGTCATAAACAAATGCCAAAAAACCATTTTTTATCCACGGAGCTATCAGCTGTGTTGCTCTGGATTGTTTGTGGGTTTCTATACCACCGTCTATACAGCACAAGCTTTCAAAAAGGAGATTTGCTTTATTTTCTCTGTCGATGTTTTTTTGTTGTTCGATTTATGTCAATAAAAGGCTGTTGGGCATCTCATGTTTGGGTCTGGATCAACATTTCGCCATTAAAACCGACTACTTCGTCGACATTTGCTTTTACTGCTATAAATGACCCAGAAGGTGATGTAAGATTGTCAATTCTGTGAACTTATTTGTATTTTTCTTAGGGTTGGGAAGTTATATTGTGA	1994	0.4313	MPDYTTGTMNDQLSKPTSIFGLRLWVVVGVCVGSAIVLLLFLISIWLASKRSKSKPSQRPSIPVVSKEIQEIRVEQPHTQNYHHHNSKPNGTHIQAEPFPEPDPVPGIERQALLPTSEEESPLGYNRIQFEIGKNHRISYPERFARSSSHGSGEARPPDQVPTVIPEVSHLGWGHWYTLRELEDSTNGFADENVIGEGGYGIVYHGILADNSNVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLSWEIRMNIILGTARGLAYLHEGLEPKVVHRDIKSSNILLDKQYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPDEVNLVDWLKKMVSNRNAEGVLDPKLVEKPTSRALKRALLVALRSTDPNAQKRPKMGHIIHMLEAEDSPNKEDRRARKEAGHSPNDRTGEELKEVTGSGDDCTLESGLHASEPR	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00514	481	Gene3D	Transferase(Phosphotransferase) domain 1	265	326	-	-
	Bach4g00514	481	MobiDBLite	consensus disorder prediction	430	465	-	-
	Bach4g00514	481	Pfam	Protein kinase domain	190	325	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g00514	481	ProSitePatterns	Protein kinases ATP-binding region signature.	195	217	IPR017441	GO:0005524
	Bach4g00514	481	Gene3D	Phosphorylase Kinase; domain 1	169	264	-	-
	Bach4g00514	481	SMART	serkin_6	189	430	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g00514	481	FunFam	Probable serine/threonine-protein kinase At1g01540	169	264	-	-
	Bach4g00514	481	Pfam	Protein tyrosine and serine/threonine kinase	326	429	IPR001245	GO:0004672\|GO:0006468
	Bach4g00514	481	PANTHER	OS01G0323000 PROTEIN	7	327	-	-
	Bach4g00514	481	Gene3D	Transferase(Phosphotransferase) domain 1	327	454	-	-
	Bach4g00514	481	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	311	323	IPR008271	GO:0004672\|GO:0006468
	Bach4g00514	481	MobiDBLite	consensus disorder prediction	79	101	-	-
	Bach4g00514	481	FunFam	Putative receptor-like serine/threonine-protein kinase	325	445	-	-
	Bach4g00514	481	SUPERFAMILY	Protein kinase-like (PK-like)	173	431	IPR011009	-
	Bach4g00514	481	ProSiteProfiles	Protein kinase domain profile.	189	417	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g00514	481	MobiDBLite	consensus disorder prediction	430	481	-	-
	Bach4g00514	481	Coils	Coil	209	229	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00514	Bach-Chr4	3450161	3453254	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach4g00514	176	431	Trihelix Transcription Factor Family	AT5G38560	40.068	6.25e-69	231

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Bach4g00514		Pkinase	3.3e-26	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00514	-		-	qsa:O6P43_024625	766.148