Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00509 GACAAAGCAGCGAATGGAATGGAAAGGAGCCCAAGAAAGAAATTCTTCAACCACCTCTGGAGAAAAAGTGCACACACAGAGACACTCTCTTCAGACCCCAAAGATAGAGAAAGCAGGGAGGTACAGGAATGGGGGATATGTACGACTATGAGAAAAATAGGTGTTCATCTTCAACCTCTGCCGTTCCTTCGTCGTCTTCACCTCAAGACGACATCTCCCTTTTTCTGAATCAAATTCTCCTTCGTTCGTCATCACCAGCTCATGTGGGTAAAAACGCACAGAGCCTCATGTCGTCAACATCCATTGCCGGACACTGCAGCAAGACCGCTACGCCGGGAAATGTATACTCTTCATATCGATCATCACTGCCTCGAGATGGGATCTCGACTGTTGATTCCATCGCTGGGGTAAGCACTTCAAGTGGTGTTCTCCTCTCGTCTTCGGGTACTTATAGTTCGACCAATATAAAGGGCAGTTCTGCTGCAAATGTGTCTTCATCCTCGGTTGGAGTGAGTGAGAATGAGACCGATGAGTATGATTGTGAAAGCGAGGAGGGCATTGATGCATTGGCGGATGAGGTGCTGGCAAAGTCTGTCCCTCCACGGAGTTCATCTAAGAGAAGCAGAGCTGCTGAAGTTCATAATTTGTCTGAAAAGAGGAGAAGGAGTAGGATTAATGAGAAAATGAAGGCACTGCAAAATCTAATTCCGAACTCTAACAAGACGGACAAGGCTTCAATGCTTGATGAAGCTATTGAATACCTTAAACAGCTTCAGCTCCAAGTACAGATGCTCGCTATAAGAAATGGATCGAGTCTGCATCCTCTGTGCTTTTCTGAAGGCTTGCAGCCTCTGCAGTTGTCCCGAATGAGGATGGAGTTTGGTGAAGAAAACAGGTCTGCGCCTTTAAGCATGGCAGCTACTCTGCCTTTCCACCAAGAAAACCCCTTTCAATATGGACGCGGTCTACCTGACAAACGCACTGTCGCAGACCAACCATCAGTACCTTCTCCGTCATACATAATGAACTCAGAAACCTCTTTTGGGTTGGAAACCCCATTCCTAGCCCATCTAAGGCCCTTTCATCTTAAAAGACCTTCAGAGGAGATATGTAGAGAAGATATATTGCAGCATCAGCAATTAAATGTAAACCATTCAGATATCAATCCATCAGGTGTTTCCCAAGGATTTGAGTCTGGCACGTTGGCTGCAGCATCAGTGTCATTTGATATGCAACCATACGAACTGAAGGACAATGGCTCGTTGGTTCTGAGAAATATTGGACCCAACCATTTACTTTCTTCACAGTTAAGTAGACTTCAGACGGGAGAAATTGCCTGCAATGACAACTTCAAGACAGAAAAATCAGATTTTTGA 1376 0.4535 MGDMYDYEKNRCSSSTSAVPSSSSPQDDISLFLNQILLRSSSPAHVGKNAQSLMSSTSIAGHCSKTATPGNVYSSYRSSLPRDGISTVDSIAGVSTSSGVLLSSSGTYSSTNIKGSSAANVSSSSVGVSENETDEYDCESEEGIDALADEVLAKSVPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLAIRNGSSLHPLCFSEGLQPLQLSRMRMEFGEENRSAPLSMAATLPFHQENPFQYGRGLPDKRTVADQPSVPSPSYIMNSETSFGLETPFLAHLRPFHLKRPSEEICREDILQHQQLNVNHSDINPSGVSQGFESGTLAAASVSFDMQPYELKDNGSLVLRNIGPNHLLSSQLSRLQTGEIACNDNFKTEKSDF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00509 415 CDD bHLH_AtPIF_like 166 227 IPR047265 -
Bach4g00509 415 MobiDBLite consensus disorder prediction 1 26 - -
Bach4g00509 415 MobiDBLite consensus disorder prediction 164 178 - -
Bach4g00509 415 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 224 IPR036638 GO:0046983
Bach4g00509 415 Gene3D - 161 224 IPR036638 GO:0046983
Bach4g00509 415 SMART finulus 172 221 IPR011598 GO:0046983
Bach4g00509 415 Pfam Helix-loop-helix DNA-binding domain 170 216 IPR011598 GO:0046983
Bach4g00509 415 MobiDBLite consensus disorder prediction 155 178 - -
Bach4g00509 415 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 21 333 IPR031066 -
Bach4g00509 415 MobiDBLite consensus disorder prediction 9 26 - -
Bach4g00509 415 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983
Bach4g00509 415 FunFam Basic helix-loop-helix transcription factor 161 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00509 Bach-Chr4 3420174 3423227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00509 131 375 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 49.194 3.37e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g00509 HLH 4.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00509 - - pcin:129321987 374.015