Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00499 ATGCCTTGTTCCAAAACGTTGTACTCTCTCATCTTCTACTTCACTCTCACTTTGATTCCCCTCTCCACCGTCATCGCCGACGTGTTCGGTGGTGTCCCCGACCAATTTCCCCCAGTGACAAACTCGCTCCTACCATCCGACGCCGTTTCATTGCTGTCTTTCAAATCAAAATCAGACCTAGATAACAAGCTCCTCTACGACCTCAATGAACGCTACGATTACTGCCAATGGCAGGGTGTCAAATGTGCCCAAGGCAGAGTGGTTCGTTTGGTTATTCAGGGCTTTGGTCTCCGTGGCCTCTTTGCTCCCAACAGCTTGACGCTCCTTGACCAGCTCCGAGTCCTGAGTCTCCGCAATAACTCGCTCTTCGGTCCTATTCCGGATCTCTCTGGGCTTTTCAATCTCAAGTCTCTCCTCCTGGACCATAATTTCTTCACAGGTTATTTCCCTCCTTCAATTTTGTTACTCCATCGCCTTCTCACTCTTTCTCTCTCGCATAACAATCTCACCGGTGTAATCCCGGTTGAGTTAAGCACTTTGGACCGGCTTATTTCTCTTCGGCTTGAATGCAACCGGTTCAATGGTAGCATTCCACCGCTGAACTACTCCTCGCTTCGAATCTTTAATGTATCCAGTAACAACTTCACCGGGCCAATTCCGGTGACGCCGACTATCGTTGGCTTCGGAGCTGCATCGTTTTTGGGGAATCCAGGTCTCTGCGGGGAGATCATTCACAGAGCATGTGGCGCTCGATCTCGATTCTTCGGTTCCACCACCACCAATGCCAGTTCCTCCTCGGCGCCTCTCGGGCAAAGCGCGGAATCACAAGGCATCATAGCAGTTCCTTCACCAAAGGAAAAGAAGAAGCATAAAGGTACTAGCTTGATCCTTGGGTTCACTATTGGGGTATCAGTGCTCATTGCTTCTATTCTCTGCGTTATCGCATTGGTCAGAAAACAGAGCATTTCTAGAGAACCGGAAAGCTCGAAAATGCAGTCATCTGAAACCACGAATGCTGTTCCGGCAACTTTTGTTTCCCAAACTCAGGGTGATCAAAACAGTGAACTGAATGCTAAGGCAAAGAAAATTGAGGAAATTCAACGAGCTCATAAGAGTGGGAATTTGGTGTTCTGTAGTAGGGAGTTGCCTCTGTATACACTTGATCAGTTAATGAGGGCCTCAGCAGAGTTACTGGGTAGGGGCACGATTGGGACCACGTACAAGGCAGTGCTGGATGGGCAGTTTATATTGACGGTGAAGAGGTTGGATGCTGGTAAAACTGCAATAACGAGCAGTGAAGTGTTCGAGCAGCATTTGGAAATGATGGGAGAGCTACGTCATCCCAATTTGGTTCCTGTTAGAGCTTATTTTCAAGCTAAAGGAGAGAGGATCGTGATCTATGATTACCAACCCAATGGCAGCCTCTCCAATCTTGTTCATGGTTCAAGATCAACAAGAGCGAAGCCTCTTCACTGGACATCATGCTTAAAGATTGCTGAAGATGTTGCACTTGGACTTGCTTACATACATCAAGCCTCAAGATTAATACATGGCAACCTAAAGTCCTCCAATGTTCTCCTGGGAGTGGACTTTGAAGCTTGTCTTACAGACTATGGTTTAGCCTTTCTTGCAGACACGTCTTCCATTGATGATCCTGACTCTGCAGCCTATAAGGCCCCGGAGAACCGCAATTCTAGCCGCCGAGCCTCACCGAAATCCGATGTCTTTGCCTTTGGGGTGCTTCTATTGGAGCTTTTAACGGGAAAACACCCCTCTCAACACCCTTTCCTTGTGCCCACGGATATGCAAGATTGGGTTAGAGCAATGAGAGATGATGATTGTACTGAAGACAACCGCCTGGGAATGCTGACAGAGGTTGCTAGTATTTGCAGTGCCACATCACCTGAGCAAAGACCGGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGGAGAGTGTGACAATGGAGGACAGTATATCTGCTAGATTTTCATAG 2001 0.4768 MPCSKTLYSLIFYFTLTLIPLSTVIADVFGGVPDQFPPVTNSLLPSDAVSLLSFKSKSDLDNKLLYDLNERYDYCQWQGVKCAQGRVVRLVIQGFGLRGLFAPNSLTLLDQLRVLSLRNNSLFGPIPDLSGLFNLKSLLLDHNFFTGYFPPSILLLHRLLTLSLSHNNLTGVIPVELSTLDRLISLRLECNRFNGSIPPLNYSSLRIFNVSSNNFTGPIPVTPTIVGFGAASFLGNPGLCGEIIHRACGARSRFFGSTTTNASSSSAPLGQSAESQGIIAVPSPKEKKKHKGTSLILGFTIGVSVLIASILCVIALVRKQSISREPESSKMQSSETTNAVPATFVSQTQGDQNSELNAKAKKIEEIQRAHKSGNLVFCSRELPLYTLDQLMRASAELLGRGTIGTTYKAVLDGQFILTVKRLDAGKTAITSSEVFEQHLEMMGELRHPNLVPVRAYFQAKGERIVIYDYQPNGSLSNLVHGSRSTRAKPLHWTSCLKIAEDVALGLAYIHQASRLIHGNLKSSNVLLGVDFEACLTDYGLAFLADTSSIDDPDSAAYKAPENRNSSRRASPKSDVFAFGVLLLELLTGKHPSQHPFLVPTDMQDWVRAMRDDDCTEDNRLGMLTEVASICSATSPEQRPAMWQVLKMIQEIKESVTMEDSISARFS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00499 666 FunFam Probable inactive receptor kinase At5g67200 46 156 - -
Bach4g00499 666 Pfam Protein tyrosine and serine/threonine kinase 396 646 IPR001245 GO:0004672|GO:0006468
Bach4g00499 666 FunFam Leucine-rich repeat receptor-like protein kinase 158 250 - -
Bach4g00499 666 SUPERFAMILY Protein kinase-like (PK-like) 396 652 IPR011009 -
Bach4g00499 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 653 IPR046959 -
Bach4g00499 666 SUPERFAMILY L domain-like 44 227 - -
Bach4g00499 666 Gene3D Phosphorylase Kinase; domain 1 356 469 - -
Bach4g00499 666 ProSiteProfiles Protein kinase domain profile. 392 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00499 666 Gene3D Transferase(Phosphotransferase) domain 1 471 664 - -
Bach4g00499 666 Gene3D Ribonuclease Inhibitor 45 200 IPR032675 -
Bach4g00499 666 Gene3D Ribonuclease Inhibitor 201 250 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00499 Bach-Chr4 3344281 3346924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00499 38 659 Receptor kinase-like Gene Family AT3G50230 55.296 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach4g00499 PK_Tyr_Ser-Thr 1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00499 - - qsa:O6P43_033846 893.264