Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00485 ATGAGTATGGCAGCTAGCAGAAAGGAAATGGAACGAATTAAAGGTCCATGGAGCCCCGAAGAAGATGATGCTCTGCAGAAACTGGTAGAGAAGCATGGACCCAGGAACTGGTCCTTGATCAGCAAATCCATTCCTGGTCGTTCTGGGAAATCCTGCAGGCTTCGTTGGTGTAATCAGCTATCTCCTCAGGTGGAACACCGTGCCTTCTCACCTGAAGAAGACGAAACCATAATCAGAGCTCATGCCCGTTTCGGCAACAAGTGGGCAACCATCGCCCGTCTTCTATCCGGGCGCACCGATAACGCTATCAAGAACCACTGGAACTCCACCTTGAAGCGCAAGTGTGCTTCCATGATATCCGATGAAAGTGGCGTCGGTGCCACTGGCTTCGATAGCAGCTATAGCCAGCAACCTCTAAAGAGGTCGGTGAGTGCTGGTGCTGCTATTCCTGTCTCCACTGGGCTTTATATGAATCCGTCCTCTCCGGGTAGCCCTTCGGGATCCGATGTCAGCGATTCCAGCGTCCCTGTTGCGTCTTCTTCCCATATATTTCGACCTGTGCCTCGAACCGGTGGAGTTCTACCTCCTGTAGAAACAACGTCGTCTACTAATGACCCTCCGACATCGTTATCCCTGTCCCTCCCTGGTGTAGATTCCTGTGAGGTATCGAATCGACCTACAGAGTTAACACAGGCACTACCACTGGCAAACACCATGCCTTTGTCATCGGTAATGGGTCCAGCGCCGGCCCCATTAGTATCTCCGATGTCGATGCAACATATGCTTCAGCTTGGTCGCGATGATCGGGGCGGTGAGTCTGGTCCATCATCGGCTGTGATGCAGAAGGGCTCCGTACCGGTGCCATTTAATTTTAGTGCTGAGCTTCTAGCTGTGATGCAGGAAATGATAAGGAAGGAGGTGAGAAATTATATGGCGGAGCAGAATGACATGTGTTTTCAGGCAGCTGATGGCTTTAGGAACGCTTCGCTGAAGCGTATCGGGGTTAGCAGGATCGATTCGTAA 1023 0.5161 MSMAASRKEMERIKGPWSPEEDDALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFSPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMISDESGVGATGFDSSYSQQPLKRSVSAGAAIPVSTGLYMNPSSPGSPSGSDVSDSSVPVASSSHIFRPVPRTGGVLPPVETTSSTNDPPTSLSLSLPGVDSCEVSNRPTELTQALPLANTMPLSSVMGPAPAPLVSPMSMQHMLQLGRDDRGGESGPSSAVMQKGSVPVPFNFSAELLAVMQEMIRKEVRNYMAEQNDMCFQAADGFRNASLKRIGVSRIDS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00485 340 PANTHER MYB PROTEIN-RELATED 14 181 - -
Bach4g00485 340 CDD SANT 68 111 IPR001005 -
Bach4g00485 340 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bach4g00485 340 FunFam MYB transcription factor 14 65 - -
Bach4g00485 340 Gene3D - 13 65 - -
Bach4g00485 340 MobiDBLite consensus disorder prediction 156 211 - -
Bach4g00485 340 MobiDBLite consensus disorder prediction 1 21 - -
Bach4g00485 340 Pfam Myb-like DNA-binding domain 17 75 - -
Bach4g00485 340 SMART sant 13 62 IPR001005 -
Bach4g00485 340 SMART sant 65 113 IPR001005 -
Bach4g00485 340 MobiDBLite consensus disorder prediction 7 21 - -
Bach4g00485 340 FunFam Transcription factor MYB44 68 114 - -
Bach4g00485 340 Gene3D - 67 125 - -
Bach4g00485 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Bach4g00485 340 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Bach4g00485 340 MobiDBLite consensus disorder prediction 195 211 - -
Bach4g00485 340 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Bach4g00485 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Bach4g00485 340 MobiDBLite consensus disorder prediction 156 180 - -
Bach4g00485 340 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00485 Bach-Chr4 3257293 3258315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00485 6 313 MYB Transcription Factor Family AT4G37260 55.663 1.56e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach4g00485 Myb_DNA-bind_6 5.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00485 K09422 - qsa:O6P43_024595 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00425 10 2989395 2990811 Bach4g00485 4 3257293 3258315 BWGD
Bach4g00485 4 3257293 3258315 Bach10g00425 10 2989395 2990811 ECH
Bach4g00485 4 3257293 3258315 Bach4g00485 4 3257293 3258315 ECH