Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00460 ATGTGTGCACTCTCGTCGCCTTGCGTGCGCCTGTTGCGCACCCTCCTAACCTGCGCATCCCCTTCCTCCCTATCTCACCCCATCGAGACAAACACCACGTCCACCACCACCATCATCGACCACCATATCAAAACCTCTTGCCATAAGCTCGAGATCTCAGATTCCAATCGCCCAGCTATGTCGAAGGCTCGTGTCTACGCCGACGTCAATGTTCTTCGCCCCAAAGAGTACTGGGATTACGAGTCTCTCACCGTTCAATGGGGTGATCAAGATGATTATGAGGTTGTCCGGAAAGTAGGAAGGGGAAAATATAGCGAAGTTTTTGAAGGTATAAATGTTAATAGCAATGAGCGTTGTATAATCAAGATTCTCAAGCCTGTCAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTTCAAAACCTTTGTGGGGGCCCAAATATTGTCAAGCTTCTTGATATTGTCAGGGATCAGCACTCAAAAACTCCCAGCTTAATATTTGAGTATGTCAACAGCACAGATTTTAAAGTTTTGTACCCAACCTTGACTGATTATGACATTCGCTATTACATATATGAGCTCCTTAAGGCCTTGGATTACTGTCATTCTCAAGGAATAATGCATAGAGATGTCAAGCCTCACAATGTTATGATAGATCATGAGTTACGGAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAAGAATATAATGTTCGTGTGGCTTCAAGATATTTTAAGGGGCCTGAACTTCTAGTTGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTTGGCTGCATGTTTGCCGGAATGATATTTCGCAAGGAACCATTCTTTTATGGTCACGACAACCACGATCAGCTTGTCAAAATTGCCAAGGTGCTTGGAACTGATGAACTCAATGCTTATCTGAATAAGTATCATCTGGAGCTGGATCCTCAACTTGACGCACTTGTTGGAAGGCACAGCCGCAAGCCATGGTCTAAATTTATTAATGCAGATAATCAGCATCTCGTGTCTCCCGAGGCAATTGATTTTCTTGATAAGCTCCTTCGATATGATCATCAAGACAGGCTAACCGCAAGAGAAGCAATGGCACATCCTTATTTCTCTCAGGTAAGGGCAGCAGAGAGTAGCAGAATGAGGACGCAGTGATCTGATGAAAATAGATCCATAAATGATATATTTGGGATTGTAACATAATACCCTAACATGCACCATGGTTACCTTTTGTTGATTATAGATCGTCAGTTTTCCTACGGAATGTAACAATATAATGAATGTTATTTCATTTGAGGAATAATTTGTTATCGTCAAGCATCGATTTGGTATCTTAAAA 1363 0.4153 MCALSSPCVRLLRTLLTCASPSSLSHPIETNTTSTTTIIDHHIKTSCHKLEISDSNRPAMSKARVYADVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRTQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00460 392 SUPERFAMILY Protein kinase-like (PK-like) 63 382 IPR011009 -
Bach4g00460 392 CDD STKc_CK2_alpha 74 378 IPR045216 GO:0004674|GO:0006468
Bach4g00460 392 Pfam Protein kinase domain 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00460 392 SMART serkin_6 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00460 392 FunFam Casein kinase II subunit alpha 170 381 - -
Bach4g00460 392 PANTHER CASEIN KINASE II SUBUNIT ALPHA 54 388 IPR045216 GO:0004674|GO:0006468
Bach4g00460 392 Gene3D Transferase(Phosphotransferase) domain 1 170 378 - -
Bach4g00460 392 FunFam Casein kinase II subunit alpha 79 169 - -
Bach4g00460 392 ProSiteProfiles Protein kinase domain profile. 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00460 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bach4g00460 392 Gene3D Phosphorylase Kinase; domain 1 93 169 - -
Bach4g00460 392 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00460 Bach-Chr4 3072897 3077536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00460 91 378 Core Cell Cycle Gene Families AT1G76540 29.450 7.85e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bach4g00460 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00460 K03097 - qsa:O6P43_033892 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00460 4 3072897 3077536 Bach10g00404 10 2829316 2832861 BWGD
Bach4g00460 4 3072897 3077536 Bach4g00460 4 3072897 3077536 ECH