Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00454 TTTCCTTCCTCTTCATTCCTTCAACTCTTGCCGTGTTCATGTGAAGGTGATTTTTCTAGAAGAATAAAAGAAAAGTTATACAGTAATAGACACTGCTTTGTTTTGAGTTTGGGTTGTTGAAAGAGGAATGAGTTGCAACGGTTGCCGAGTTCTTCGAAAGGGTTGTAGCGAGTCCTGTATTCTTCGCCCTTGTTTGCAGTGGATCGAGAGCCCTGAAGCTCAAGGCCATGCCACCGTCTTTGTAGCCAAGTTCTTTGGCCGCGCTGGTCTCATGTCTTTCATTTCCAACGTCCCTGAAAATCAAAGACCTGCTCTTTTTCAGTCTTTGTTGTTTGAAGCATGTGGGCGAACGGTGAACCCTGTGAATGGTGCTGTAGGGCTTCTATGGACGGGAAACTGGCACGTGTGCCAGGCGGCCGTGGAGACCGTGCTCCGTGGCGGCACATTAAGACCCATGCCAGAGCTTCTCGGCCTAGATGCTCCAACTCCGGTCGCCGATGAGGCGTCCGAAGCGGAGGTTACCTGCACGGACATGTGGATGGTCCGAGATCCGAATCCGAAACCCCGTTTAACGAATTCGCGATCCAATAAGGTGTCTTCTGGCAAACGCCGTCGATCCGATGATAGCACCAAGCTCCAAAGCACTGATCTCGATCTCCGATTGACGCCTATCTTCCTGCAGAAATCTTCGAGCTACAGCTACAGACCCGAAATTCGCCGGCCGGGTACGCCGTCGATGAACTCGGAGGAATCCGTCACGACGATGGATAGTGCTCTTAAAGATCAGTATGCTAATGGAGAAGACCGGAAGCTTCTCAACCTTTTCAATTAAGGAGTTTCTCTGTCTCATATTCATGTTTTTTGGTGAATCTACAGCTGATCACACGGACGGCTAGTCTGGTGTAATATTCCTCTATTTACTCTTTTTTTTTTTTATAATGCTTTTGTATCGGGGAAGAGGGTGTACCCGGACTTGGAATCCGGCGAGTTTTGTAATATACCGTCACAGGATTTCTCTCTTTGTTGAAGTTTGTAGACGAAGAGAGAAAGATGAGGGTTCATCGGTGATCCTTTCTTCTTCTTTTTCTTTTTCCACTTTTTGCCCTCCTTAATTTTGTCTGGCAAACACGTTACTATGTTAGGACCGTGTGACAAGAA 1158 0.4741 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELLGLDAPTPVADEASEAEVTCTDMWMVRDPNPKPRLTNSRSNKVSSGKRRRSDDSTKLQSTDLDLRLTPIFLQKSSSYSYRPEIRRPGTPSMNSEESVTTMDSALKDQYANGEDRKLLNLFN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00454 234 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bach4g00454 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 233 - -
Bach4g00454 234 MobiDBLite consensus disorder prediction 138 171 - -
Bach4g00454 234 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bach4g00454 234 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00454 Bach-Chr4 3037275 3038527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00454 1 233 AS2 family AT3G49940 58.203 6.58e-88 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach4g00454 LOB 3.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00454 - - qsa:O6P43_024565 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00454 4 3037275 3038527 Bach11g00331 11 2240992 2241658 BWGD
Bach10g00398 10 2785161 2785959 Bach4g00454 4 3037275 3038527 BWGD
Bach4g00454 4 3037275 3038527 Bach10g00398 10 2785161 2785959 ECH
Bach4g00454 4 3037275 3038527 Bach4g00454 4 3037275 3038527 ECH