Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00444 ATGGCGAGCTCTGGCTCTCCGTTTTCCCTTTTGTGTCACGAAAACGATGATAGCTTGTTGCAAGAGAACGACGATGAAGATACTGTTATACAACCGATCAACCCAGGTTTCGATTTGGACAATGATGACCAATATATTGAGATATTGTTTCAAAAGGAACGGGAATTTGTTTCCCAAGGTTTCCCGTTGTCCTCTGATGATATGAGTGTCCGTCTGAAATCCGTTGAGTGGATTTTCAATACTCAGGAAATGCTTGGGTTCCAAGTTCATACAGCTTATTTGTCAGTGACATACTTTGATCGGTTCTTTTCTCGGCGATCCGTTAATGAAGCTCAACCATGGGGTGTTCAATTATTATCGTTGGGATGTTTATCTTTGGCAGCAAAGATGGAAGAGCAGAAGGTGCCGTCTCTATGCGATTATCCAGTGCCAGATTATATCTTCGATAACAAAACGATTCAGGATATGGAACTATTGATTTTGAGTTGCTTGGAATGGAAAATGGGAACAGTAACTCCTTTTGCGTATCTGCATTACCTCGTCAAGAAGTTCTGCGGCCAATCTAGACAAGAAATAATAGTCTGCAGAGCCGTAGAACATCTTGTGGCCATCGCAAAAGACGTTAATTTGATGGATCATCGACCATCAATTATTGCCTCTGCTGCTATATTGGCAGCCTTTGATGGTACATTAACAAGACAGACTATAAACAATCGGATAAGTGTCATCTCATCGTGGGGATCTCCAGAAAGTGAACATGTTTTCTCTTGTTATAATCTAATGCAGGAAATTGCAAGAAAAAAAACTAAGAACACTCCTGTCTCTGATGTGTTGTCAACCAGTTCGAGCTCACCTGATGCTCCAGAGCATTCCTCTCTCACTTCTTCTCCGAGAGCCAAGAGAAAACTTGATTTTAACGGCGGTGAAGATATTCCCGTACAAAAAGTACATAGGTCTTGA 960 0.4146 MASSGSPFSLLCHENDDSLLQENDDEDTVIQPINPGFDLDNDDQYIEILFQKEREFVSQGFPLSSDDMSVRLKSVEWIFNTQEMLGFQVHTAYLSVTYFDRFFSRRSVNEAQPWGVQLLSLGCLSLAAKMEEQKVPSLCDYPVPDYIFDNKTIQDMELLILSCLEWKMGTVTPFAYLHYLVKKFCGQSRQEIIVCRAVEHLVAIAKDVNLMDHRPSIIASAAILAAFDGTLTRQTINNRISVISSWGSPESEHVFSCYNLMQEIARKKTKNTPVSDVLSTSSSSPDAPEHSSLTSSPRAKRKLDFNGGEDIPVQKVHRS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00444 319 SMART Cyclin_C_2 171 297 IPR004367 -
Bach4g00444 319 CDD CYCLIN_AtCycD-like_rpt1 70 166 - -
Bach4g00444 319 Pfam Cyclin, N-terminal domain 52 168 IPR006671 -
Bach4g00444 319 CDD CYCLIN_AtCycD-like_rpt2 171 261 - -
Bach4g00444 319 SMART cyclin_7 76 162 IPR013763 -
Bach4g00444 319 Gene3D - 66 169 - -
Bach4g00444 319 PANTHER CYCLINS 42 270 IPR039361 -
Bach4g00444 319 FunFam Cyclin-D5-1 67 169 - -
Bach4g00444 319 Pfam Cyclin, C-terminal domain 171 273 IPR004367 -
Bach4g00444 319 SUPERFAMILY Cyclin-like 37 168 IPR036915 -
Bach4g00444 319 Gene3D - 170 257 - -
Bach4g00444 319 MobiDBLite consensus disorder prediction 302 319 - -
Bach4g00444 319 MobiDBLite consensus disorder prediction 271 294 - -
Bach4g00444 319 MobiDBLite consensus disorder prediction 271 319 - -
Bach4g00444 319 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00444 Bach-Chr4 2961080 2962491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00444 10 251 Core Cell Cycle Gene Families AT4G37630 34.109 2.67e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00444 K18811 - qsa:O6P43_033904 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00444 4 2961080 2962491 Bach4g00444 4 2961080 2962491 ECH