Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00427 ATGCCTGTCTCCAACGAACATCCAACTCTTGACTTGTTCTGCGACGAGGCAGCTAGCGACGTCGTTTCCTTGGATTCCAACATTCCAAACGATGAACCCGATGCGGGTTTTAATGTCCAATGCGAATCCAATGAAGAAAGCTACGTTTTGAGCCTATTAGAATCTGAACTTGATCAAACACTGGGAAAACAACAATCACTAGGACAACTTTACAAGAAAACATGCTTCAGAACAGCTCGAGGAGAAGCCATAAATTGGATGCTGAAGGTGCATGCTTACTACAGATTTAGCCCTGAGACGGCATACCTTTCTGTAAATTATCTTGATCGCTTTCTTTTATCTCGAACATTATCGGTACAGTTTATTCAAATTGAAGTTGATTTTGATGACAAACGCGGAATAAAATTTCTTCTCAGCAATCATTTTAGTAGTGTTGGTTTACTTGTGCAGCAAGATAAAGGATGGCCTATGCAGCTGTTGGCAGTTGCTTGCCTGTCATTGGCAGCAAAAATGGAAGAAACAAGAGTGCCACTTCTATTAGATTTACAAGCGATTCAACCCAGGCTCTCGTTTAAGCCTAGAACGGTTAAAAGAATGGAGCTCTTGGTCATGGCCAGTCTCAAGTGGCGATTGCGCACCATAACGCCATTTGAATTTATCCAATTTTTCATTTCTAAGCTTTCATGCTCTGCTTCCCCATTTGGTGACTTCAATCATATTATTTCTCGTGTCTCAGATGTTATTATCCGGACATGTACAGTAATGGATTTCCTGGAGTTTCCACCGTCCACAATAGCAGCAGCTGCATTGCTATGGGTAACAGATCAATATTTTGATGGCCAGAAATTAGGCTGCTTCCACAAGAACATAAGCAGAGAGATGGTGCAGAAATGTTACAACCTTATGAAGGAGAAAGTTCCCCGATCAGAACATGATGTGCCAAAGAAAACATACTTGCGTGCTTGA 966 0.4161 MPVSNEHPTLDLFCDEAASDVVSLDSNIPNDEPDAGFNVQCESNEESYVLSLLESELDQTLGKQQSLGQLYKKTCFRTARGEAINWMLKVHAYYRFSPETAYLSVNYLDRFLLSRTLSVQFIQIEVDFDDKRGIKFLLSNHFSSVGLLVQQDKGWPMQLLAVACLSLAAKMEETRVPLLLDLQAIQPRLSFKPRTVKRMELLVMASLKWRLRTITPFEFIQFFISKLSCSASPFGDFNHIISRVSDVIIRTCTVMDFLEFPPSTIAAAALLWVTDQYFDGQKLGCFHKNISREMVQKCYNLMKEKVPRSEHDVPKKTYLRA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00427 321 Gene3D - 213 298 - -
Bach4g00427 321 Pfam Cyclin, C-terminal domain 214 309 IPR004367 -
Bach4g00427 321 PANTHER CYCLINS 41 306 IPR039361 -
Bach4g00427 321 CDD CYCLIN_AtCycD-like_rpt1 79 209 - -
Bach4g00427 321 Gene3D - 152 212 - -
Bach4g00427 321 Gene3D - 64 117 - -
Bach4g00427 321 SMART cyclin_7 85 205 IPR013763 -
Bach4g00427 321 Pfam Cyclin, N-terminal domain 73 118 IPR006671 -
Bach4g00427 321 Pfam Cyclin, N-terminal domain 156 211 IPR006671 -
Bach4g00427 321 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Bach4g00427 321 SUPERFAMILY Cyclin-like 196 302 IPR036915 -
Bach4g00427 321 SUPERFAMILY Cyclin-like 76 209 IPR036915 -
Bach4g00427 321 CDD CYCLIN_AtCycD-like_rpt2 214 302 - -
Bach4g00427 321 FunFam D6-type cyclin 203 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00427 Bach-Chr4 2863477 2864717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00427 10 303 Core Cell Cycle Gene Families AT1G70210 36.755 1.01e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00427 K18810 - gmx:100799323 316.235