Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00423 ATGCCGATGTTTCAGCCTTCCAAGAGAGATAGAATTGCTGGGTTCGAGGGTGGGGGTGACGGCCAGATTCTAGATCTGGATACCGCTGTCAAAGATGGGGTTTTAGGTGGTGTTGACGGTGGGATTGTAGGAGCTGGGGTTGGTGAGAAATTGGATCTGGGGAAGATGATTGAAGAGCTGGACTTGTCTGAAGTGCCCTCTGTCTTCATCTGCCCAATCTCCCTTGAACCAATGCAAGACCCAGTGACGCTTTGCACCGGCCAAACCTATGAGAGGTCCAACATTCTCAAATGGTTCAGTTTGGGCCACTTGACCTGCCCCACCACGATGCAAGAGCTCTGGGACGATTCCATTACTCCAAATACGACACTTTACCGTCTAATTTACGCTTGGTTTTCTCAAAAATATTTGCTCATGAAGAAGAGATCGGAAGACGTGCAGGGGAGGGCATCAGAACTTGTGGAGACACTGAAGAAGGTCAAGGGCCAATCTCGAGTTCAAGCCCTCAAGGAGCTCCATCAAGTTGTCACTGCTCACGCCAATGCCCATAAGACTATAATTGACGAAGTTGGAGTCTCTGTAATCTCATCATTACTCGGCCCTTTTACTTCCCATGCTGTTGGTTCCGAGGTCATTGGCATTCTTGTAAGTTTGTCTCTTGATTCTGAATCAAAAAAGAATTTAATGCAACCTGCAAAGATTTCGTTAATGGTGGATATTTTGAATGAGGGTTCAATTGAGACGAAAATCAATTGTACCAGACTGATTGAATCGTTAATTGAAGAGAAGGATTTTCGATCGGAGATTATCACAAGCCATAGCCTTTTGGTCGGGTTGATGAGGCTGGTGAAGGATAAGAGACACACAAATGGAATTCTTCCTGGACTTAGCCTACTTAGATCAATATGCTTGCATAAAGAAGTAAGGAATTTGCTTGTGAGCATTGGGGCTGTTTCTCAGTTGGTTGAACTGTTGTCTGGTCTTGATCCCGTTTATTTGGAATTTGCCCTTTCCATCTTAGATGCATTAGCGTCTATACCTGAAGGCAGAGTAGCTTTGAAGAATTGTTCTCGCACCATACCCACCATGGTGAAACTGTTGATGAAGGTTTCTGAGAATTGCACCCAATATGCATTGTCAATCCTATGGTCTGTGTGCAAACTTGCGCCAGAGGAGTGTTCGTCGATTGCTGTAGATGCAGGACTCGCAGCAAAACTCCTCCTTGTGATTCAGAGTGGTTGTAATCCTATATTGAAACAACAGTCTGCTGAGCTTTTGAAGCTGTGTAGTTTAAATTATTCGGATACCATCTTCATTTCCAAGTGCAAGCTTACCAGAACCATCCAATGA 1350 0.4467 MPMFQPSKRDRIAGFEGGGDGQILDLDTAVKDGVLGGVDGGIVGAGVGEKLDLGKMIEELDLSEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHLTCPTTMQELWDDSITPNTTLYRLIYAWFSQKYLLMKKRSEDVQGRASELVETLKKVKGQSRVQALKELHQVVTAHANAHKTIIDEVGVSVISSLLGPFTSHAVGSEVIGILVSLSLDSESKKNLMQPAKISLMVDILNEGSIETKINCTRLIESLIEEKDFRSEIITSHSLLVGLMRLVKDKRHTNGILPGLSLLRSICLHKEVRNLLVSIGAVSQLVELLSGLDPVYLEFALSILDALASIPEGRVALKNCSRTIPTMVKLLMKVSENCTQYALSILWSVCKLAPEECSSIAVDAGLAAKLLLVIQSGCNPILKQQSAELLKLCSLNYSDTIFISKCKLTRTIQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00423 449 SUPERFAMILY ARM repeat 153 435 IPR016024 -
Bach4g00423 449 SUPERFAMILY RING/U-box 59 135 - -
Bach4g00423 449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 139 IPR013083 -
Bach4g00423 449 ProSiteProfiles U-box domain profile. 64 138 IPR003613 GO:0004842|GO:0016567
Bach4g00423 449 CDD RING-Ubox_PUB 66 116 IPR045210 -
Bach4g00423 449 Pfam U-box domain 65 135 IPR003613 GO:0004842|GO:0016567
Bach4g00423 449 PANTHER WDSAM1 PROTEIN 61 435 IPR045185 GO:0061630
Bach4g00423 449 Gene3D - 149 439 IPR011989 -
Bach4g00423 449 SMART Ubox_2 68 131 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00423 Bach-Chr4 2838194 2839543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00423 1 449 U-box Gene Family AT3G49810 74.833 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00423 - - gmx:100816457 775.393