Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00412 CCCCTGTAAACTGCGAGCAGAAGCAGGTTTTCATGGCCGAAACAAGTAAAACCCCATCCAAAGAAACTGAATGGCAATATGAAGAAGAGGAGAAAACTTTCGAAGATATTGGTTTGGATGCTCGTCTTACTCGTGCTTTACTCAAAAAAGGAGTTGATAAACCGACTCCTATTCAGCGGGTCGGAATTCCATTGATATTGGAAGGTAAGGATGTAGTTGCTCGAGCAAAGACGGGTTCTGGGAAGACTTTTGCATACCTTATTCCTTTGCTTCAGAAGTTGTTTACAAAAAATCTTCAAAGAAAGAAGCTTGCACCCAATGCATTTATTCTCGTCCCAACGAGAGAATTGTGTCAACAGGTTTATGCGGAGGTCTTATCTCTCATTGAATTATGCAGAGTTCAATTGAAAGTTGTGCAGTTGACAAGTAATATGCGAGCTTCTGATTTGAGGGCAGCACTAGCAGGACCCCCAGATGTTTTAATTTCCACACCTGCTTGCATATCAAAATGCCTGTCCACTGGTGTACTTCAAGCGGCATCCATTAATGATTCACTTGAAACTCTAGTTCTTGATGAGGCAGATCTTCTATTATCATACGGCTATGAGAATGATATAAAAGCTTTTGCAACCCATGTACCCAGAAGTTGTCAGTGTCTTCTTATGTCTGCAACAACAAGTCCTGATGTTGACAAACTAAAGAAGTTGATTTTACACAACCCGTTTATTTTGACTTTGCCTGAAGTAGGAAATCATAAGGACGAGGTCATCCCTAAAAATGTTCAGCAGTTTTGGATCTCATGCCCTGCCAGTGATAAGTTGCTTTACGTCCTTTCCCTGTTGAAGTTGGAACTGATCCAAAAAAAAGTTTTGATATTCACCAATTCCATAGACATGAGTTTCAGGTTAAAACTATTTCTGGAAAAGTTTGGGATCAAATCTGCCGTTTTAAATGCTGAGTTGCCACTGAATTCGCGTCTCCATATTCTTGAGGAATTCAATGCTGGTCTCTTTGATTATCTAATTGCGACTGATGACAGCCAGACAAAGGAGAATGAGGAAGCAAAGGAAAGTAATGGTGAATCAAGAAAGTCAAAAAAACGTGTCAAGCAAAAGTTAGATTCTGAATTTGGAGTAGTGAGGGGAATCGACTTTAAAAATGTATCCACGGTTATAAATTTTGCAATGCCAAAAAGTGTTGCAGGATATGTACATCGAATTGGACGTACTGGCAGAGCATACAATTCTGGTGCTTCTGTTTCTTTGGTTTCTTCTGATGAGATAGAAATTTTAGAAGAAATAAAATCTTTTGTTGGGGATGATGAAAACAAGGGCTTAAACTTGATTGCTGAATTTCCCTTTCTAACCAAGAATGCGGTGGAATCTTTACGATATAGGGCTGAGGACGTTGCCAAGAGTGTAACAAAAATTGCTGTCCGAGAATCACGTGCACAAGATTTGAGGAATGAAATTATGAACTCTGAAAAGTTGAAGGCCCATTTTGAAAGTAATCCAAGGGACCTAGATCTATTGAAGCATGACAAAGTTCTTAGCAAGACTGCTCCTCCTCCGCACCTACGTGATGTGCCCGACTACCTATTAGACAAAACAACCAAAGAGGCAAGGGCAATGGTCAAGCTTGCTGGGGATGCAATGGGACATAATAATCGCCGCAGGGGATTCAAGAAAAAATTCAGAAAAGGTGGAGACCCTCTGAAGGCGGTCTCTGCTGAGGCGTCGAAAAGGGCACGCAAGGGTGTCACAAAGAGTGGTGCAAGTCAAAGCAGTGATGGGAATATGCGCAAAAAGAAACAAAGAATTTGATTAATATGTTAGGTTTTTT 1842 0.4061 MAETSKTPSKETEWQYEEEEKTFEDIGLDARLTRALLKKGVDKPTPIQRVGIPLILEGKDVVARAKTGSGKTFAYLIPLLQKLFTKNLQRKKLAPNAFILVPTRELCQQVYAEVLSLIELCRVQLKVVQLTSNMRASDLRAALAGPPDVLISTPACISKCLSTGVLQAASINDSLETLVLDEADLLLSYGYENDIKAFATHVPRSCQCLLMSATTSPDVDKLKKLILHNPFILTLPEVGNHKDEVIPKNVQQFWISCPASDKLLYVLSLLKLELIQKKVLIFTNSIDMSFRLKLFLEKFGIKSAVLNAELPLNSRLHILEEFNAGLFDYLIATDDSQTKENEEAKESNGESRKSKKRVKQKLDSEFGVVRGIDFKNVSTVINFAMPKSVAGYVHRIGRTGRAYNSGASVSLVSSDEIEILEEIKSFVGDDENKGLNLIAEFPFLTKNAVESLRYRAEDVAKSVTKIAVRESRAQDLRNEIMNSEKLKAHFESNPRDLDLLKHDKVLSKTAPPPHLRDVPDYLLDKTTKEARAMVKLAGDAMGHNNRRRGFKKKFRKGGDPLKAVSAEASKRARKGVTKSGASQSSDGNMRKKKQRI 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00412 596 Gene3D - 237 438 IPR027417 -
Bach4g00412 596 PANTHER RNA HELICASE 10 525 - -
Bach4g00412 596 Pfam DEAD/DEAH box helicase 45 222 IPR011545 GO:0003676|GO:0005524
Bach4g00412 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 428 IPR027417 -
Bach4g00412 596 CDD DEADc_DDX56 28 235 - -
Bach4g00412 596 Gene3D - 2 235 IPR027417 -
Bach4g00412 596 MobiDBLite consensus disorder prediction 540 596 - -
Bach4g00412 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 234 IPR027417 -
Bach4g00412 596 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 52 233 IPR014001 -
Bach4g00412 596 Coils Coil 473 493 - -
Bach4g00412 596 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 21 49 IPR014014 GO:0003724
Bach4g00412 596 SMART ultradead3 40 253 IPR014001 -
Bach4g00412 596 CDD SF2_C_DEAD 250 412 - -
Bach4g00412 596 SMART helicmild6 290 403 IPR001650 -
Bach4g00412 596 Pfam Helicase conserved C-terminal domain 261 403 IPR001650 -
Bach4g00412 596 MobiDBLite consensus disorder prediction 556 574 - -
Bach4g00412 596 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 268 449 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00412 Bach-Chr4 2773402 2777954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00412 16 420 Eukaryotic Initiation Factors Gene Family AT3G13920 27.206 3.46e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00412 K14810 - gmx:100800749 914.45